RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 RUNDC3AQ59EK9 446 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.3□□□□□ -0.28
NFKB1-201ENST00000226574 RTP2Q5QGT7 225 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 PLPP4Q5VZY2 271 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 MEX3DQ86XN8 651 aaKnown RBP13.3□□□□□ -0.28
NFKB1-201ENST00000226574 NPAS3Q8IXF0 933 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 TBC1D15Q8TC07 691 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 SORCS1Q8WY21 1168 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 AP3S1Q92572 193 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 FAM129BQ96TA1 746 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 C5AR2Q9P296 337 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 POU2F3Q9UKI9 436 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 SNX7Q9UNH6 387 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 HSPB11Q9Y547 144 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 FAM172BPA6NC97 362 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 KIAA0513O60268 411 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 CPN2P22792 545 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 RORCP51449 518 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 ACLYP53396 1101 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 FAM214AQ32MH5 1076 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 TBRG1Q3YBR2 411 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 GPR33Q49SQ1 333 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 POMZP3Q6PJE2 187 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 ANKRD13BQ86YJ7 626 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 MFSD2AQ8NA29 543 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 CHDHQ8NE62 594 aaPredicted RBP13.3□□□□□ -0.28
NFKB1-201ENST00000226574 OR10H4Q8NGA5 316 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 OR9Q2Q8NGE9 314 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 ARRDC2Q8TBH0 407 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 TMCO6Q96DC7 493 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 SLC7A5P2Q9GIP4 190 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 IRF2BPLQ9H1B7 796 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 OR51E2Q9H255 320 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 ZNF282Q9UDV7 671 aaPredicted RBP13.3□□□□□ -0.28
NFKB1-201ENST00000226574 YIPF1Q9Y548 306 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 SELPP16109 830 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 CCND3P30281 292 aaPredicted RBP13.3□□□□□ -0.28
NFKB1-201ENST00000226574 C10orf62Q5T681 223 aaPredicted RBP13.3□□□□□ -0.28
NFKB1-201ENST00000226574 HOMEZQ8IX15 550 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 SLC5A8Q8N695 610 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 OR2T11Q8NH01 316 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 FCGR1BQ92637 280 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 GPR78Q96P69 363 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 TMEM246Q9BRR3 403 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 FAIM2Q9BWQ8 316 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 MTG2Q9H4K7 406 aa13.3□□□□□ -0.28
NFKB1-201ENST00000226574 PAQR5Q9NXK6 330 aaPredicted RBP13.3□□□□□ -0.28
NFKB1-201ENST00000226574 A0A1W2PQ72 361 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 SMAD6O43541 496 aaKnown RBP13.29□□□□□ -0.28
NFKB1-201ENST00000226574 OXSR1O95747 527 aaPredicted RBP13.29□□□□□ -0.28
NFKB1-201ENST00000226574 TCEA1P23193 301 aaKnown RBP13.29□□□□□ -0.28
NFKB1-201ENST00000226574 FSHRP23945 695 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 HTR1BP28222 390 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 MAT2AP31153 395 aaKnown RBP13.29□□□□□ -0.28
NFKB1-201ENST00000226574 RPL3P39023 403 aaKnown RBP13.29□□□□□ -0.28
NFKB1-201ENST00000226574 EXOC3L2Q2M3D2 409 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 SDE2Q6IQ49 451 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 ARMC6Q6NXE6 501 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 ELMSAN1Q6PJG2 1045 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 Q6ZSR9 355 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 CHMP1BQ7LBR1 199 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 TMCO2Q7Z6W1 182 aaPredicted RBP13.29□□□□□ -0.28
NFKB1-201ENST00000226574 KCNH6Q9H252 994 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 ANKRA2Q9H9E1 313 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 IL20RAQ9UHF4 553 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 PRAMEF33A0A0G2JMD5 474 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 NDUFB5O43674 189 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 PRAMEF10O60809 474 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 EOMESO95936 686 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 FUCA1P04066 466 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 SBK3P0C264 359 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 ATP1B2P14415 290 aaPredicted RBP13.29□□□□□ -0.28
NFKB1-201ENST00000226574 ITIH1P19827 911 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 PIGAP37287 484 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 DPY19L1Q2PZI1 675 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 AKIRIN2Q53H80 203 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 SLC35F1Q5T1Q4 408 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 THOC7Q6I9Y2 204 aaKnown RBP13.29□□□□□ -0.28
NFKB1-201ENST00000226574 APCDD1Q8J025 514 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 SLCO4A1Q96BD0 722 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 IL17FQ96PD4 163 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 IGFLR1Q9H665 355 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 ING4Q9UNL4 249 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 SPACA6W5XKT8 324 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 GRM6O15303 877 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 TLL1O43897 1013 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 CXCR2P25025 360 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 GJA5P36382 358 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 SNRPD2P62316 118 aaKnown RBP13.29□□□□□ -0.28
NFKB1-201ENST00000226574 MVKQ03426 396 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 GALNT1Q10472 559 aaPredicted RBP13.29□□□□□ -0.28
NFKB1-201ENST00000226574 LHFPL3Q86UP9 236 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 OOSP2Q86WS3 158 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 FAM129CQ86XR2 697 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 TIGD4Q8IY51 512 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 SH3RF2Q8TEC5 729 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 PIK3R3Q92569 461 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 PGAP3Q96FM1 320 aaPredicted RBP13.29□□□□□ -0.28
NFKB1-201ENST00000226574 VMP1Q96GC9 406 aa13.29□□□□□ -0.28
NFKB1-201ENST00000226574 TUBA1CQ9BQE3 449 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms