RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 HOMEZQ8IX15 550 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 SRRM1Q8IYB3 904 aaKnown RBP13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 BANPQ8N9N5 519 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 CREB3L4Q8TEY5 395 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 AICDAQ9GZX7 198 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 KLHL31Q9H511 634 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 IPPKQ9H8X2 491 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 ZBTB26Q9HCK0 441 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 ZFP69BQ9UJL9 534 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 PCTPQ9UKL6 214 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 ANGPTL3Q9Y5C1 460 aa13.71□□□□□ -0.21
SUPT4H1-201ENST00000225504 SCN3AQ9NY46 2000 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 A0A0A6YYC8 382 aaPredicted RBP13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 A0A1B0GX78 115 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 G3V2L1 256 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 I3L1I5 382 aaPredicted RBP13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 COPEO14579 308 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 OR7A17O14581 309 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 FFAR3O14843 346 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 GPR42O15529 346 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 PLIN3O60664 434 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 GLRA3O75311 464 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 SPAG7O75391 227 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 B3GALT4O96024 378 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 AGXTP21549 392 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 CASP2P42575 452 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 CCT5P48643 541 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 CDH13P55290 713 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 DCDP81605 110 aaKnown RBP13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 PCDH1Q08174 1060 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 HYAL2Q12891 473 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 UNC50Q53HI1 259 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 CEP85LQ5SZL2 805 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 ARHGAP40Q5TG30 622 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 MLIPQ5VWP3 458 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 TMIGD1Q6UXZ0 262 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 VN1R5Q7Z5H4 357 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.7□□□□□ -0.228e-6■■■■■ 46.4
SUPT4H1-201ENST00000225504 CNPY4Q8N129 248 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 PROKR1Q8TCW9 393 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 KIAA1143Q96AT1 154 aaPredicted RBP13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 PTCD3Q96EY7 689 aaKnown RBP13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 EHD1Q9H4M9 534 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 NOL11Q9H8H0 719 aaKnown RBP13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 GRID1Q9ULK0 1009 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 TMCO1Q9UM00 188 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 FARSAQ9Y285 508 aaKnown RBP13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 TNPO3Q9Y5L0 923 aaKnown RBP13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 LAMA5O15230 3695 aa13.7□□□□□ -0.22
SUPT4H1-201ENST00000225504 PTPRQQ9UMZ3 2332 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 A0A1B0GTL3 188 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 TXNDC9O14530 226 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 NDUFS4O43181 175 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 DNAJB6O75190 326 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 TBX6O95947 436 aaPredicted RBP13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 ONECUT2O95948 504 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 ATP5F1P24539 256 aaPredicted RBP13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 AHRP35869 848 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 HNF4AP41235 474 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 EMP3P54852 163 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 CXADRP78310 365 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 E2F2Q14209 437 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 TBCCQ15814 346 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 MUM1Q2TAK8 710 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 ATP1A1-AS1Q5TC04 95 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 YOD1Q5VVQ6 348 aaPredicted RBP13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 TMEM214Q6NUQ4 689 aaKnown RBP13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 KRT78Q8N1N4 520 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 ENDOVQ8N8Q3 282 aaKnown RBP13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 CAMKVQ8NCB2 501 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 MYRIPQ8NFW9 859 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 OR52B6Q8NGF0 335 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 OR9A4Q8NGU2 314 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 ZCCHC10Q8TBK6 192 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 CDK15Q96Q40 435 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 NLNQ9BYT8 704 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 NT5DC2Q9H857 520 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 COPG2Q9UBF2 871 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 RNF11Q9Y3C5 154 aa13.69□□□□□ -0.22
SUPT4H1-201ENST00000225504 C4orf51C9J302 202 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 K7ENP7 123 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 KLF7O75840 302 aaPredicted RBP13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 RPS17P08708 135 aaKnown RBP13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 FURINP09958 794 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 TAC1P20366 129 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 IMPDH1P20839 514 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 CXCR2P25025 360 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 PTPN4P29074 926 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 PRKAA2P54646 552 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 TMPRSS3P57727 454 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 VAC14Q08AM6 782 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 PWP1Q13610 501 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 SYT16Q17RD7 645 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 ZNF678Q5SXM1 525 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 GARNL3Q5VVW2 1013 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 MRPL14Q6P1L8 145 aaKnown RBP13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 INO80CQ6PI98 192 aaPredicted RBP13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 LRIG3Q6UXM1 1119 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 ZYG11AQ6WRX3 759 aa13.68□□□□□ -0.22
SUPT4H1-201ENST00000225504 OVCH1Q7RTY7 1134 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms