RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 PIAS3Q9Y6X2 628 aa18.37■□□□□ 0.53
SMPD3-201ENST00000219334 ADAMTS3O15072 1205 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 DNAJA1P31689 397 aaKnown RBP18.36■□□□□ 0.53
SMPD3-201ENST00000219334 DGKQP52824 942 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 OGDHQ02218 1023 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 DHCR24Q15392 516 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 PCYT2Q99447 389 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 APOBEC3BQ9UH17 382 aaKnown RBP18.36■□□□□ 0.53
SMPD3-201ENST00000219334 MATN1P21941 496 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 MTTPP55157 894 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 TMEM198Q66K66 360 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 METTL27Q8N6F8 245 aaPredicted RBP18.36■□□□□ 0.53
SMPD3-201ENST00000219334 SLCO2A1Q92959 643 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 WDR45Q9Y484 360 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 PEX16Q9Y5Y5 336 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 FAM170BA6NMN3 283 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 M0QX08 132 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 ECHS1P30084 290 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 NTSR1P30989 418 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 ZDHHC14Q8IZN3 488 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 GIN1Q9NXP7 522 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 TAS2R9Q9NYW1 312 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 TBC1D24Q9ULP9 559 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 DLGAP4Q9Y2H0 992 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 ZNF840PA6NDX5 716 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 CXorf49A8MYA2 514 aaPredicted RBP18.36■□□□□ 0.53
SMPD3-201ENST00000219334 CAPN5O15484 640 aaPredicted RBP18.36■□□□□ 0.53
SMPD3-201ENST00000219334 PGAM2P15259 253 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 ZNF630Q2M218 657 aaPredicted RBP18.36■□□□□ 0.53
SMPD3-201ENST00000219334 IDNKQ5T6J7 187 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 SDR16C5Q8N3Y7 309 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 NFKBIDQ8NI38 313 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 XKR8Q9H6D3 395 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 RNF11Q9Y3C5 154 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 A0A1W2PRG6 482 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 MTHFD1P11586 935 aaKnown RBP18.36■□□□□ 0.53
SMPD3-201ENST00000219334 PFKLP17858 780 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 HNF1BP35680 557 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 ID2Q02363 134 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 LASP1Q14847 261 aaKnown RBP18.36■□□□□ 0.53
SMPD3-201ENST00000219334 PON3Q15166 354 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 ARMC10Q8N2F6 343 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 EBF4Q9BQW3 602 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 RC3H2Q9HBD1 1191 aaKnown RBP18.36■□□□□ 0.53
SMPD3-201ENST00000219334 POMPQ9Y244 141 aa18.36■□□□□ 0.53
SMPD3-201ENST00000219334 RICTORQ6R327 1708 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 NPC1O15118 1278 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 MAGP20916 626 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 OR12D2P58182 307 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 ADGRE1Q14246 886 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 TGFBIQ15582 683 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 C10orf62Q5T681 223 aaPredicted RBP18.35■□□□□ 0.53
SMPD3-201ENST00000219334 NPAS3Q8IXF0 933 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 CCDC36Q8IYA8 594 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 HERC2P3Q9BVR0 1158 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 A0A1W2PRQ8 180 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 SAGE2PA6NJ88 616 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 GBAP04062 536 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 RPLP0P05388 317 aaKnown RBP18.35■□□□□ 0.53
SMPD3-201ENST00000219334 CCNOP22674 350 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 PLP2Q04941 152 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 MADCAM1Q13477 382 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 FAM189A2Q15884 450 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 LINGO2Q7L985 606 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 TXNDC5Q8NBS9 432 aaKnown RBP18.35■□□□□ 0.53
SMPD3-201ENST00000219334 SMG8Q8ND04 991 aaKnown RBP18.35■□□□□ 0.53
SMPD3-201ENST00000219334 EZH1Q92800 747 aaPredicted RBP18.35■□□□□ 0.53
SMPD3-201ENST00000219334 CPNE2Q96FN4 548 aaPredicted RBP18.35■□□□□ 0.53
SMPD3-201ENST00000219334 MVB12BQ9H7P6 319 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 TNFRSF10DQ9UBN6 386 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 B4GALT7Q9UBV7 327 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 TLR4O00206 839 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 FARS2O95363 451 aaKnown RBP18.35■□□□□ 0.53
SMPD3-201ENST00000219334 PDHA2P29803 388 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 SMSP52788 366 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 PITPNAQ00169 270 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 TMEM234Q8WY98 164 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 TGM7Q96PF1 710 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 TSGA13Q96PP4 275 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 CD180Q99467 661 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 KAT8Q9H7Z6 458 aaKnown RBP18.35■□□□□ 0.53
SMPD3-201ENST00000219334 GLS2Q9UI32 602 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 PCDHGB2Q9Y5G2 931 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 MAU2Q9Y6X3 613 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 OR6C74A6NCV1 312 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 ZNF217O75362 1048 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 PAX7P23759 505 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 ZNF627Q7L945 461 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 ASPGQ86U10 573 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 TMEM17Q86X19 198 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 RAB43Q86YS6 212 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 YIPF7Q8N8F6 280 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 C7orf57Q8NEG2 295 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 ZFP3Q96NJ6 502 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 TPT1P8Q9HAU6 139 aa18.35■□□□□ 0.53
SMPD3-201ENST00000219334 PRSS51A0A1B0GVH4 220 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 ZNF670-ZNF695F2Z2N8 137 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 SHOX2O60902 331 aaPredicted RBP18.34■□□□□ 0.53
SMPD3-201ENST00000219334 RFPL2O75678 378 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 F7P08709 466 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 248.2 ms