RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 FZD3Q9NPG1 666 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 AGPAT4Q9NRZ5 378 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 PTTG2Q9NZH5 202 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 RAB26Q9ULW5 256 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 ST14Q9Y5Y6 855 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 GFYI3L273 518 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 VILLO15195 856 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 TFAP2AP05549 437 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 ANXA6P08133 673 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 LAMP1P11279 417 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 ADRB3P13945 408 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 ZNF8P17098 575 aaPredicted RBP9.61□□□□□ -0.87
USP11-201ENST00000218348 IMPA1P29218 277 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 MTHFRP42898 656 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 BCAP31P51572 246 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 CHRNB3Q05901 458 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 GTF2H3Q13889 308 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 SMAD2Q15796 467 aaKnown RBP9.61□□□□□ -0.87
USP11-201ENST00000218348 SPESP1Q6UW49 350 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 FAM83HQ6ZRV2 1179 aaPredicted RBP9.61□□□□□ -0.87
USP11-201ENST00000218348 MMP21Q8N119 569 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 MARVELD2Q8N4S9 558 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 FLCNQ8NFG4 579 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 NETO1Q8TDF5 533 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 JPH3Q8WXH2 748 aaPredicted RBP9.61□□□□□ -0.87
USP11-201ENST00000218348 SNX19Q92543 992 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 MAL2Q969L2 176 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 SPNS1Q9H2V7 528 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 RDH14Q9HBH5 336 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 PRDM6Q9NQX0 595 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 AASSQ9UDR5 926 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 SERGEFQ9UGK8 458 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 VPS13AQ96RL7 3174 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 AQP12BA6NM10 295 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 MYO1GB0I1T2 1018 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 MID1O15344 667 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 YY2O15391 372 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 CLOCKO15516 846 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 SERPINA1P01009 418 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 CBSLP0DN79 551 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 JAK1P23458 1154 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 CBSP35520 551 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 NKX2-5P52952 324 aaPredicted RBP9.61□□□□□ -0.87
USP11-201ENST00000218348 TBPL1P62380 186 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 VAC14Q08AM6 782 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 FCHO2Q0JRZ9 810 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 CDONQ4KMG0 1287 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 CEP78Q5JTW2 689 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 TTC33Q6PID6 262 aaPredicted RBP9.61□□□□□ -0.87
USP11-201ENST00000218348 DPPA4Q7L190 304 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 TRIM46Q7Z4K8 759 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 GATAD2AQ86YP4 633 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 AQP12AQ8IXF9 295 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 TOR1AIP2Q8NFQ8 470 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 OR5AR1Q8NGP9 310 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 ZNF480Q8WV37 535 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 USP7Q93009 1102 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 ZUFSPQ96AP4 578 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 CENPNQ96H22 339 aaPredicted RBP9.61□□□□□ -0.87
USP11-201ENST00000218348 SLC23A2Q9UGH3 650 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 ATPIF1Q9UII2 106 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 ERVK-11Q9UQG0 969 aa9.61□□□□□ -0.87
USP11-201ENST00000218348 TCRBV5S2A0A599 114 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 ELOVL7A1L3X0 281 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 LRRC72A6NJI9 287 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 H3BSA7 217 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 hCG_2039718K7EN88 272 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 RTCAO00442 366 aaKnown RBP9.6□□□□□ -0.87
USP11-201ENST00000218348 DENRO43583 198 aaKnown RBP9.6□□□□□ -0.87
USP11-201ENST00000218348 PRNPP04156 253 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 NUDT7P0C024 238 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 EEF1B2P24534 225 aaKnown RBP9.6□□□□□ -0.87
USP11-201ENST00000218348 PTGER1P34995 402 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 SLC6A12P48065 614 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 EEFSECP57772 596 aaKnown RBP9.6□□□□□ -0.87
USP11-201ENST00000218348 SMAD4Q13485 552 aaKnown RBP9.6□□□□□ -0.87
USP11-201ENST00000218348 DMC1Q14565 340 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 HNRNPA1L2Q32P51 320 aaKnown RBP9.6□□□□□ -0.87
USP11-201ENST00000218348 PLEKHS1Q5SXH7 462 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 LRRC70Q7Z2Q7 622 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 GALNT5Q7Z7M9 940 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 HEATR4Q86WZ0 1026 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 HUS1BQ8NHY5 278 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 SMARCD2Q92925 531 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 TMBIM1Q969X1 311 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 DGCR14Q96DF8 476 aaKnown RBP9.6□□□□□ -0.87
USP11-201ENST00000218348 DTD2Q96FN9 168 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 COX4I2Q96KJ9 171 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 FAM129BQ96TA1 746 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 ADI1Q9BV57 179 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 CLMPQ9H6B4 373 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 MARCH7Q9H992 704 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 CLDND1Q9NY35 253 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 GDE1Q9NZC3 331 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 SCHIP1Q9P0W5 487 aaPredicted RBP9.6□□□□□ -0.87
USP11-201ENST00000218348 NEUROG3Q9Y4Z2 214 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 TRBV23OR9-2A0A075B6M9 112 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 PRAMEF33A0A0G2JMD5 474 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 CXCR6O00574 342 aa9.6□□□□□ -0.87
USP11-201ENST00000218348 CNOT3O75175 753 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms