RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 PNPOQ9NVS9 261 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 MARCOQ9UEW3 520 aaPredicted RBP26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 AP1M2Q9Y6Q5 423 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 PMS2P1A4D2B8 440 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 P2RX6O15547 441 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 KRT6AP02538 564 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 KRT6BP04259 564 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 ITIH1P19827 911 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 KRT6CP48668 564 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 FOXR1Q6PIV2 292 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 SCIMPQ6UWF3 145 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 CLYBLQ8N0X4 340 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 GALNT15Q8N3T1 639 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 CSNK1A1LQ8N752 337 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 TTLQ8NG68 377 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 OR1L3Q8NH93 324 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 SLC13A3Q8WWT9 602 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 SELENOMQ8WWX9 145 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 ZNF501Q96CX3 271 aaPredicted RBP26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 RHBGQ9H310 441 aa26.03■■□□□ 1.76
CHMP4B-201ENST00000217402 CCDC187A0A096LP49 1063 aa26.02■■□□□ 1.76
CHMP4B-201ENST00000217402 FGF4P08620 206 aa26.02■■□□□ 1.76
CHMP4B-201ENST00000217402 HKDC1Q2TB90 917 aa26.02■■□□□ 1.76
CHMP4B-201ENST00000217402 DGLUCYQ7Z3D6 616 aa26.02■■□□□ 1.76
CHMP4B-201ENST00000217402 BMPERQ8N8U9 685 aa26.02■■□□□ 1.76
CHMP4B-201ENST00000217402 APMAPQ9HDC9 416 aa26.02■■□□□ 1.76
CHMP4B-201ENST00000217402 EPB41L3Q9Y2J2 1087 aaPredicted RBP26.02■■□□□ 1.76
CHMP4B-201ENST00000217402 SRPX2O60687 465 aaPredicted RBP26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 SH3BGRLO75368 114 aa26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 ULK1O75385 1050 aa26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 PDYNP01213 254 aa26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 MSL3P1P0C860 447 aa26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 KITP10721 976 aa26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 RPL14P50914 215 aaKnown RBP26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 ABRAXAS2Q15018 415 aa26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 C3orf38Q5JPI3 329 aa26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 WASHC2DQ5SRD0 308 aa26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 TRPV3Q8NET8 790 aa26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 CREB3L4Q8TEY5 395 aa26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 ZNF473Q8WTR7 871 aaKnown RBP26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 C7orf26Q96N11 449 aa26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 CTRCQ99895 268 aa26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 SPRTNQ9H040 489 aaPredicted RBP26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 PISDQ9UG56 409 aa26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 HAO1Q9UJM8 370 aa26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 DNAJC15Q9Y5T4 150 aa26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 MDC1Q14676 2089 aaKnown RBP26.01■■□□□ 1.75
CHMP4B-201ENST00000217402 A0A1W2PNU3 283 aaPredicted RBP26■■□□□ 1.75
CHMP4B-201ENST00000217402 MAGEB17A8MXT2 336 aa26■■□□□ 1.75
CHMP4B-201ENST00000217402 SKAP2O75563 359 aaPredicted RBP26■■□□□ 1.75
CHMP4B-201ENST00000217402 OR2B3O76000 313 aa26■■□□□ 1.75
CHMP4B-201ENST00000217402 SLC35G6P0C7Q6 338 aa26■■□□□ 1.75
CHMP4B-201ENST00000217402 PHEXP78562 749 aa26■■□□□ 1.75
CHMP4B-201ENST00000217402 TMPRSS7Q7RTY8 843 aa26■■□□□ 1.75
CHMP4B-201ENST00000217402 CRLF3Q8IUI8 442 aa26■■□□□ 1.75
CHMP4B-201ENST00000217402 CACTIN-AS1Q8N1I8 211 aa26■■□□□ 1.75
CHMP4B-201ENST00000217402 TWIST2Q8WVJ9 160 aa26■■□□□ 1.75
CHMP4B-201ENST00000217402 RNF31Q96EP0 1072 aa26■■□□□ 1.75
CHMP4B-201ENST00000217402 DMRT3Q9NQL9 472 aa26■■□□□ 1.75
CHMP4B-201ENST00000217402 RARRES3Q9UL19 164 aa26■■□□□ 1.75
CHMP4B-201ENST00000217402 SATB2Q9UPW6 733 aa26■■□□□ 1.75
CHMP4B-201ENST00000217402 PTGDR2Q9Y5Y4 395 aa26■■□□□ 1.75
CHMP4B-201ENST00000217402 PLD2O14939 933 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 CHEK2O96017 543 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 JMJD7P0C870 316 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 GSTM2P28161 218 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 SERPINB1P30740 379 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 MAPK10P53779 464 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 ITGA1P56199 1179 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 RPS13P62277 151 aaKnown RBP25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 MC2RQ01718 297 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 EIF3IQ13347 325 aaKnown RBP25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 CAMKVQ8NCB2 501 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 TM4SF19Q96DZ7 209 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 ZNF285Q96NJ3 590 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 CCDC134Q9H6E4 229 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 SLC39A1Q9NY26 324 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 SERTAD3Q9UJW9 196 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 RUVBL1Q9Y265 456 aaKnown RBP25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 TSC22D4Q9Y3Q8 395 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 KIF26BQ2KJY2 2108 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 CLEC3AO75596 197 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 TGFB1P01137 390 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 ETV5P41161 510 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 PIK3CBP42338 1070 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 RGS1Q08116 209 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 PDCD2Q16342 344 aaPredicted RBP25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 UGT3A2Q3SY77 523 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 TCTE1Q5JU00 501 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 DDIASQ8IXT1 998 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 GPR135Q8IZ08 494 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 ZNF655Q8N720 491 aaPredicted RBP25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 KCT2Q8NC54 265 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 WDR36Q8NI36 951 aaKnown RBP25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 USP7Q93009 1102 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 PMEPA1Q969W9 287 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 SEC16BQ96JE7 1060 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 ADGRE2Q9UHX3 823 aa25.99■■□□□ 1.75
CHMP4B-201ENST00000217402 DCHS1Q96JQ0 3298 aa25.98■■□□□ 1.75
CHMP4B-201ENST00000217402 B4E171 279 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms