RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 COQ8BQ96D53 544 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 CXorf40BQ96DE9 158 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 BBS2Q9BXC9 721 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 SP140LQ9H930 580 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 FKBP14Q9NWM8 211 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 CFAP97Q9P2B7 532 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 B4GALT6Q9UBX8 382 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 SRRDQ9UH36 339 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 VPS4AQ9UN37 437 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 BTBD3Q9Y2F9 522 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 SH3BP1Q9Y3L3 701 aa12.83□□□□□ -0.35
SRP54-201ENST00000216774 KRT87PA6NCN2 255 aa12.83□□□□□ -0.36
SRP54-201ENST00000216774 CLCA1A8K7I4 914 aa12.83□□□□□ -0.36
SRP54-201ENST00000216774 TMEM229AB2RXF0 380 aa12.83□□□□□ -0.36
SRP54-201ENST00000216774 E7EQ34 232 aa12.83□□□□□ -0.36
SRP54-201ENST00000216774 PSIP1O75475 530 aaKnown RBP12.83□□□□□ -0.36
SRP54-201ENST00000216774 NUDT7P0C024 238 aa12.83□□□□□ -0.36
SRP54-201ENST00000216774 LIPAP38571 399 aa12.83□□□□□ -0.36
SRP54-201ENST00000216774 SELENOWP63302 87 aa12.83□□□□□ -0.36
SRP54-201ENST00000216774 RAE1P78406 368 aaKnown RBP12.83□□□□□ -0.36
SRP54-201ENST00000216774 SLC7A9P82251 487 aa12.83□□□□□ -0.36
SRP54-201ENST00000216774 SPIN4Q56A73 249 aa12.83□□□□□ -0.36
SRP54-201ENST00000216774 GPR153Q6NV75 609 aa12.83□□□□□ -0.36
SRP54-201ENST00000216774 USP43Q70EL4 1123 aa12.83□□□□□ -0.36
SRP54-201ENST00000216774 LMLNQ96KR4 655 aa12.83□□□□□ -0.36
SRP54-201ENST00000216774 ZDHHC6Q9H6R6 413 aa12.83□□□□□ -0.36
SRP54-201ENST00000216774 CPNE5Q9HCH3 593 aa12.83□□□□□ -0.36
SRP54-201ENST00000216774 MRPL17Q9NRX2 175 aaKnown RBP12.83□□□□□ -0.36
SRP54-201ENST00000216774 NDUFAF4Q9P032 175 aa12.83□□□□□ -0.36
SRP54-201ENST00000216774 ZNF282Q9UDV7 671 aaPredicted RBP12.83□□□□□ -0.36
SRP54-201ENST00000216774 LYVE1Q9Y5Y7 322 aa12.83□□□□□ -0.36
SRP54-201ENST00000216774 COL4A6Q14031 1691 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 A8MVJ9 347 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 UPK3BL1B0FP48 263 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 UPK3BL2E5RIL1 263 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 TNFRSF11BO00300 401 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 RNASET2O00584 256 aaKnown RBP12.82□□□□□ -0.36
SRP54-201ENST00000216774 KDM1AO60341 852 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 UPK1BO75841 260 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 CDK1P06493 297 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 CKMP06732 381 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 ANXA4P09525 319 aaPredicted RBP12.82□□□□□ -0.36
SRP54-201ENST00000216774 ANXA8P13928 327 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 CTSKP43235 329 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 POLR2LP62875 67 aaKnown RBP12.82□□□□□ -0.36
SRP54-201ENST00000216774 SP3Q02447 781 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 CD300CQ08708 224 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 GAB1Q13480 694 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 DDX39BQ13838 428 aaKnown RBP12.82□□□□□ -0.36
SRP54-201ENST00000216774 TIGD6Q17RP2 521 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 ZNF181Q2M3W8 571 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 INAVAQ3KP66 663 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 FBXO43Q4G163 708 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 CATSPEREQ5SY80 951 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 C1orf52Q8N6N3 182 aaKnown RBP12.82□□□□□ -0.36
SRP54-201ENST00000216774 KCNC2Q96PR1 638 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 FEVQ99581 238 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 FAM83CQ9BQN1 747 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 SCHIP1Q9P0W5 487 aaPredicted RBP12.82□□□□□ -0.36
SRP54-201ENST00000216774 SPASTQ9UBP0 616 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 MAFFQ9ULX9 164 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 UGT2A1Q9Y4X1 527 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 PCDHGA4Q9Y5G9 962 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 METTL15A6NJ78 407 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 ZBBXA8MT70 800 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 ARHGEF33A8MVX0 844 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 QSOX1O00391 747 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 SGTAO43765 313 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 BNIP3LO60238 219 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 GCM2O75603 506 aaPredicted RBP12.82□□□□□ -0.36
SRP54-201ENST00000216774 ZNF30P17039 623 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 IDSP22304 550 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 DCDC1P59894 354 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 PPIGQ13427 754 aaKnown RBP eCLIP12.82□□□□□ -0.366e-7■□□□□ 10.2
SRP54-201ENST00000216774 TSEN54Q7Z6J9 526 aaKnown RBP12.82□□□□□ -0.36
SRP54-201ENST00000216774 SLC22A16Q86VW1 577 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 ARMC8Q8IUR7 673 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 AMER2Q8N7J2 671 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 CHTF18Q8WVB6 975 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 MAL2Q969L2 176 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 ABHD8Q96I13 439 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 RAD9AQ99638 391 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 SGK2Q9HBY8 427 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 ZBTB20Q9HC78 741 aaPredicted RBP12.82□□□□□ -0.36
SRP54-201ENST00000216774 ANKMY1Q9P2S6 941 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 CD84Q9UIB8 345 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 PNMA8BQ9ULN7 279 aaPredicted RBP12.82□□□□□ -0.36
SRP54-201ENST00000216774 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.82□□□□□ -0.36
SRP54-201ENST00000216774 POFUT2Q9Y2G5 429 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 TET1Q8NFU7 2136 aa12.82□□□□□ -0.36
SRP54-201ENST00000216774 OBSL1O75147 1896 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 TRIM43BA6NCK2 446 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 MGAT4DA6NG13 374 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 AGAP5A6NIR3 686 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 M0R082 166 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 VIPP01282 170 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 TGFBR1P36897 503 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 SYT16Q17RD7 645 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.81□□□□□ -0.36
SRP54-201ENST00000216774 PRSS36Q5K4E3 855 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms