RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 LOC105369274A0A096LPK9 316 aa19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 LOC102723532A0A0G2JNH3 316 aa19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 TRABD2BA6NFA1 517 aa19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 URADA6NGE7 173 aa19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 TMEM114B3SHH9 223 aa19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 NVLO15381 856 aaKnown RBP19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 CPNE3O75131 537 aaKnown RBP19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 DXOO77932 396 aaKnown RBP19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 CD22P20273 847 aa19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 HMOX2P30519 316 aa19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 WDR4P57081 412 aaKnown RBP19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 SHC2P98077 582 aa19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 IFT88Q13099 833 aa19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 NDUFA9Q16795 377 aa19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 ZCCHC23Q6ZST2 131 aa19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 LAS2Q8IYD9 372 aa19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 OR4N4Q8N0Y3 316 aa19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 RAB3IL1Q8TBN0 382 aa19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 CCT6BQ92526 530 aa19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 ULBP3Q9BZM4 244 aa19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 ELOVL6Q9H5J4 265 aa19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 TXLNGQ9NUQ3 528 aa19.28■□□□□ 0.68
RHBDD3-201ENST00000216085 PMS2P1A4D2B8 440 aa19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 HCRTR1O43613 425 aa19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 LCMT2O60294 686 aaKnown RBP19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 PRAMEF4O60810 478 aa19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 GALNT1Q10472 559 aaPredicted RBP19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 GARNL3Q5VVW2 1013 aa19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 PRAMEF9Q5VWM5 478 aa19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 ATG16L1Q676U5 607 aa19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 PWWP2BQ6NUJ5 590 aa19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 KIRREL3Q8IZU9 778 aa19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 AGAP11Q8TF27 550 aa19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 PRR11Q96HE9 360 aaPredicted RBP19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 SLC29A3Q9BZD2 475 aa19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 SPRTNQ9H040 489 aaPredicted RBP19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 RHBGQ9H310 441 aa19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 ACTR5Q9H9F9 607 aaPredicted RBP19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 ENAMQ9NRM1 1142 aa19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 INTS9Q9NV88 658 aaKnown RBP19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 TSC22D4Q9Y3Q8 395 aa19.27■□□□□ 0.68
RHBDD3-201ENST00000216085 CLEC3AO75596 197 aa19.27■□□□□ 0.67
RHBDD3-201ENST00000216085 OR4F21O95013 312 aa19.27■□□□□ 0.67
RHBDD3-201ENST00000216085 KRT6AP02538 564 aa19.27■□□□□ 0.67
RHBDD3-201ENST00000216085 KRT6BP04259 564 aa19.27■□□□□ 0.67
RHBDD3-201ENST00000216085 KRT6CP48668 564 aa19.27■□□□□ 0.67
RHBDD3-201ENST00000216085 EMP3P54852 163 aa19.27■□□□□ 0.67
RHBDD3-201ENST00000216085 ERVPABLB-1P60509 514 aa19.27■□□□□ 0.67
RHBDD3-201ENST00000216085 CYP4F2P78329 520 aa19.27■□□□□ 0.67
RHBDD3-201ENST00000216085 ZRSR2Q15696 482 aaKnown RBP19.27■□□□□ 0.67
RHBDD3-201ENST00000216085 MUM1Q2TAK8 710 aa19.27■□□□□ 0.67
RHBDD3-201ENST00000216085 LETMD1Q6P1Q0 360 aa19.27■□□□□ 0.67
RHBDD3-201ENST00000216085 VN1R4Q7Z5H5 301 aa19.27■□□□□ 0.67
RHBDD3-201ENST00000216085 ANKRD53Q8N9V6 530 aa19.27■□□□□ 0.67
RHBDD3-201ENST00000216085 OR7G3Q8NG95 312 aa19.27■□□□□ 0.67
RHBDD3-201ENST00000216085 METTL6Q8TCB7 284 aa19.27■□□□□ 0.67
RHBDD3-201ENST00000216085 MOCOSQ96EN8 888 aa19.27■□□□□ 0.67
RHBDD3-201ENST00000216085 HYKKA2RU49 373 aa19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 FITM1A5D6W6 292 aa19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 ZNF749O43361 778 aa19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 BRINP1O60477 761 aa19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 HSPA4LO95757 839 aa19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 SERPINA6P08185 405 aa19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 CHN1P15882 459 aa19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 BGNP21810 368 aa19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 PIK3CBP42338 1070 aa19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 STXBP1P61764 594 aaKnown RBP19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 SKP1P63208 163 aa19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 FRG2Q64ET8 278 aa19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 SYVN1Q86TM6 617 aa19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 CDYL2Q8N8U2 506 aa19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 CLIP3Q96DZ5 547 aa19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 TM4SF19Q96DZ7 209 aa19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 ZNF578Q96N58 590 aaPredicted RBP19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 FRG2BQ96QU4 278 aa19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 CENPKQ9BS16 269 aa19.26■□□□□ 0.67
RHBDD3-201ENST00000216085 C9orf172C9J069 976 aa19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 PPP6CO00743 305 aa19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 KIAA0754O94854 1291 aa19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 CHEK2O96017 543 aa19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 CAPN1P07384 714 aa19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 SLC5A2P31639 672 aa19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 TGM3Q08188 693 aa19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 STX3Q13277 289 aa19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 DDX39BQ13838 428 aaKnown RBP19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 HKDC1Q2TB90 917 aa19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 PRTGQ2VWP7 1150 aa19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 NIPAL1Q6NVV3 410 aa19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 ABHD13Q7L211 337 aa19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 CUZD1Q86UP6 607 aa19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 MDM1Q8TC05 714 aa19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 NT5CQ8TCD5 201 aa19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 STARD5Q9NSY2 213 aa19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 CUTCQ9NTM9 273 aa19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 ZNF490Q9ULM2 529 aaPredicted RBP19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 RUVBL1Q9Y265 456 aaKnown RBP19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 NCOR2Q9Y618 2525 aa19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 MDC1Q14676 2089 aaKnown RBP19.25■□□□□ 0.67
RHBDD3-201ENST00000216085 CDRT15L2A8MXV6 281 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms