RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Arhgap12Q8C0D4 838 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Smoc2Q8CD91 447 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Q8CDN1 933 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Arel1Q8CHG5 823 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Eif3lQ8QZY1 564 aaKnown RBP8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Ctu1Q99J10 420 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Q99LU8 229 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Tmem208Q9CR96 173 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Taf1dQ9D4V4 322 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Oser1Q9D722 291 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Tnfrsf21Q9EPU5 655 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Bin3Q9JI08 253 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Fbxo17Q9QZM8 286 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Stau1Q9Z108 487 aaKnown RBP8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Gm28710A0A1B0GR31 962 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Olfr1023A2ASU6 311 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Il1bP10749 269 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Prkar1bP12849 381 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 InmtP40936 264 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Dsc1P55849 886 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Tbx1P70323 479 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Tbx6P70327 436 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 NfycP70353 335 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 JupQ02257 745 aaKnown RBP8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Zyg11bQ3UFS0 744 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 KrtdapQ3V2T4 102 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Klra2Q60660 288 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Slc23a3Q60850 611 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Bcar1Q61140 874 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 HiraQ61666 1015 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Pfkfb4Q6DTY7 469 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Nudcd1Q6PIP5 582 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Olfr1036Q7TR85 310 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Ikzf5Q8BU00 419 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Dpp9Q8BVG4 862 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Guf1Q8C3X4 651 aaKnown RBP8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Nlrp10Q8CCN1 673 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Zbtb9Q8CDC7 459 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Ero1bQ8R2E9 467 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Olfr1311Q8VET0 312 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Olfr665Q8VG79 316 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 AclyQ91V92 1091 aaKnown RBP8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Slc44a3Q921V7 656 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Dpy30Q99LT0 99 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Ankrd7Q9D504 279 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Tex22Q9D9U4 189 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Pop5Q9DB28 169 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Dclk1Q9JLM8 756 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Pkp3Q9QY23 797 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Kcne5Q9QZ26 143 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 DnpepQ9Z2W0 473 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Olfr239A0PK55 315 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Zfp973A2BE20 318 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Aldoart1A6ZI46 419 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 TagapB2RWW0 714 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 5830411N06RikB3F5L4 1112 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Vmn2r73D3Z7M3 851 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Spdye4cI6XKQ3 339 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Olfr55K7N6Q1 315 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Olfr1564K7N6V7 318 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Ephb6O08644 1014 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Pbx3O35317 434 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Ech1O35459 327 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Cyp1a2P00186 513 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 H2-EaP01904 255 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 P04224 255 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Itgb1P09055 798 aaKnown RBP8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Eef1a1P10126 462 aaKnown RBP8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Apoc3P33622 99 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Gdf5P43027 495 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Eef1a2P62631 463 aaKnown RBP8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 CcnjQ3TZI6 379 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Syndig1lQ3USQ7 237 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Kcna5Q61762 602 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Dmc1Q61880 340 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Usf2Q64705 346 aaKnown RBP8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Olfr1308Q7TQX0 320 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Trim36Q80WG7 729 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Ubash3bQ8BGG7 638 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Slco2b1Q8BXB6 683 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Nt5dc1Q8C5P5 467 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Fam126bQ8C729 530 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Dcaf12l1Q8CBW4 501 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 GmdsQ8K0C9 372 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 GabrpQ8QZW7 440 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Olfr1047Q8VGS0 319 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Mrpl54Q9CPW3 135 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Q9D1F3 157 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Snx29Q9D3S3 818 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Rhox2aQ9D4Y3 191 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Pdzk1Q9JIL4 519 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Rpl38Q9JJI8 70 aaKnown RBP8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Pias4Q9JM05 507 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 B9d1Q9R1S0 204 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Avpr1bQ9WU02 421 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Tcf7l1Q9Z1J1 584 aa8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Clic1Q9Z1Q5 241 aaKnown RBP8.03□□□□□ -1.12
Cdc40-201ENSMUST00000044166 Fam136b-psA0A140T8T1 138 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Gm21964A0A1W2P7S4 437 aa8.02□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Vmn2r17E9PYF5 849 aa8.02□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 56.2 ms