RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 ElocP83940 112 aaKnown RBP11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Arf5P84084 180 aaKnown RBP11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Pld2P97813 933 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Mmp11Q02853 492 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gpr174Q3U507 335 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Cdk15Q3V3A1 433 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Irf4Q64287 450 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Bhlhb9Q6PB60 539 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Mfn1Q811U4 741 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Ift80Q8K057 777 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 TmieQ8K467 153 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Vmn1r22Q8R2D1 302 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Pofut2Q8VHI3 429 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gjd3Q91YD1 278 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Btnl6A2CG22 539 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Slc28a1E9PXX9 648 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gm6502L7N456 481 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Cab39Q06138 341 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Rsrp1Q3UC65 298 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Ccser2Q3UHI0 833 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Doxl2Q6IMK7 723 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Myoz3Q8R4E4 245 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Ptgr2Q8VDQ1 351 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Pcdh18Q8VHR0 1134 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Rab28Q99KL7 221 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 PclafQ9CQX4 110 aaKnown RBP11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Fabp12Q9DAK4 132 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Akr1e2Q9DCT1 301 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Nipa2Q9JJC8 359 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Spata6lB2RV46 347 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 2610021A01RikE9Q0Q3 834 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Ldb2O55203 373 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 P01644 108 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 P01645 108 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 P01646 108 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 P01647 108 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 AdaP03958 352 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Anxa2P07356 339 aaKnown RBP11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Lsm3P62311 102 aaKnown RBP11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Tbpl1P62340 186 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Abraxas2Q3TCJ1 415 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Ephx3Q3V1F8 367 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Tas2r13Q7M720 305 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Sephs1Q8BH69 392 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Q8BHG2 160 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gpr1Q8K087 353 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Akirin1Q99LF1 191 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Alg14Q9D081 217 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Hacd2Q9D3B1 254 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Slc43a3A2AVZ9 502 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Srp54bE9PXC0 504 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Vmn2r51L7N215 852 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 mt-Co3P00416 261 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Cpa3P15089 417 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Slc39a12Q5FWH7 689 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Nadsyn1Q711T7 725 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Mblac2Q8BL86 279 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Spata2lQ8BNN1 426 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Arrb1Q8BWG8 418 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Peli3Q8BXR6 445 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Sidt2Q8CIF6 832 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Tcaf2Q921K8 919 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 PglsQ9CQ60 257 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 DstnQ9R0P5 165 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Asb3Q9WV72 525 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr49Q9Z1V0 313 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Ly75Q60767 1723 aa11.51□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Myh10Q61879 1976 aaKnown RBP11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Vmn2r75G5E8Z7 853 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 MntO08789 591 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Opn1mwO35599 359 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 F2P19221 618 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Crisp1Q03401 244 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 TifaQ793I8 184 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 DdnQ80TS7 710 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Psd4Q8BLR5 1005 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Tmem214Q8BM55 687 aaKnown RBP11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 CipcQ8R0W1 432 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gadd45gip1Q9CR59 222 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 MtpapQ9D0D3 585 aaKnown RBP11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Natd1Q9DBW3 110 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Igkv10-96A0A140T8M1 115 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Chrna10B2RX82 447 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Zscan4bE9Q3G0 505 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 St3gal5O88829 414 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Tyrp1P07147 537 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Mup4P11590 178 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Fabp1P12710 127 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Pnrc1Q3TWH3 297 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gm14226Q3TZL0 686 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Rslcan18Q7M6X5 460 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Jazf1Q80ZQ5 243 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Sirt5Q8K2C6 310 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 St7lQ8K4P7 559 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Pcdhga12Q91XY7 932 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gtf2e2Q9D902 292 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Dclk1Q9JLM8 756 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Kiaa1522A2A7S8 1013 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Zfp563B8JJZ9 448 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Irf1P15314 329 aa11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms