RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Reps1O54916 795 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Cntn1P12960 1020 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Klk1b9P15949 261 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Ube2e3P52483 207 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 VaspP70460 375 aaKnown RBP14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Slc45a4Q0P5V9 785 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 CamkvQ3UHL1 512 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Q5SPV6 233 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 CishQ62225 257 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Orai3Q6P8G8 290 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Olfr1251Q7TQZ3 318 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Ddhd1Q80YA3 547 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Znf592Q8BHZ4 1262 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Map4k5Q8BPM2 847 aaKnown RBP14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Banf2Q8BVR0 90 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Nt5dc1Q8C5P5 467 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Nudt13Q8JZU0 352 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Rbmx2Q8R0F5 326 aaKnown RBP14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Vmn1r219Q8R271 312 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Arrb2Q91YI4 410 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 HcstQ9QUJ0 79 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Opn4Q9QXZ9 521 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Usp18Q9WTV6 368 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Oc90Q9Z0L3 485 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Ybx2Q9Z2C8 360 aaKnown RBP14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Slc8a3S4R2P9 928 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Cfap54Q8C6S9 3106 aa14.1□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Gm21731A0A286YDE9 180 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Cytl1A1E5L0 139 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Gm13088A2AGW6 460 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Gm3373A6NAS7 205 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Vmn2r76E9Q3F5 853 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 C130060K24RikG3UWA8 416 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Elovl3O35949 271 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 E2f6O54917 272 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Ckmt1P30275 418 aaKnown RBP14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Fbxo40P62932 710 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Tbx6P70327 436 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Fezf1Q0VDQ9 475 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 RflnbQ5SVD0 216 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Arhgap20Q6IFT4 1182 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Acap2Q6ZQK5 770 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 RflnaQ7TS73 204 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Hsfy2Q80Y37 392 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Abhd16bQ80YU0 474 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Tspan12Q8BKT6 305 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Hat1Q8BY71 416 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Agpat4Q8K4X7 378 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Zc3h10Q8R205 435 aaKnown RBP14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Actr8Q8R2S9 624 aaKnown RBP14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Pofut2Q8VHI3 429 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Dennd2dQ91VV4 469 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Crtc3Q91X84 619 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Cers2Q924Z4 380 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Arpc2Q9CVB6 300 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Agpat5Q9D1E8 365 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Mphosph6Q9D1Q1 161 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 ApmapQ9D7N9 415 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Cdkl2Q9QUK0 568 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Dach1Q9QYB2 751 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Cacna1cQ01815 2139 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 HelzQ6DFV5 1964 aaKnown RBP14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Kctd14A0A0U1RNG7 287 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Tmem74bA2AU34 232 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Izumo4D3Z690 227 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Vmn2r103E9PWW0 856 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Znf296E9Q6W4 445 aaKnown RBP14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Gm20878L7N244 103 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 EmdO08579 259 aaKnown RBP14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Ackr2O08707 378 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Timp1P12032 205 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 TfamP40630 243 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Casp3P70677 277 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Csrp2P97314 193 aaKnown RBP14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Dab1P97318 588 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Epha4Q03137 986 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Slc30a10Q3UVU3 470 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Tmem65Q4VAE3 234 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Rassf5Q5EBH1 413 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Map3k3Q61084 626 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Nsg1Q62092 185 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 ZpbpQ62522 350 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Tlr12Q6QNU9 906 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Prss54Q7M756 383 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Lrfn3Q8BLY3 626 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Mettl2Q8BMK1 389 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Cdkl1Q8CEQ0 352 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Rcor1Q8CFE3 480 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Sh3glb2Q8R3V5 400 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Lsm1Q8VC85 133 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Mul1Q8VCM5 352 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 DgkgQ91WG7 788 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Pcdhga4Q91XY4 930 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Egln2Q91YE2 419 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Cstf3Q99LI7 717 aaKnown RBP14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Prelid3bQ9CYY7 195 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 1700109H08RikQ9D9C0 210 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Lrrc69Q9D9Q0 347 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Tmbim4Q9DA39 238 aa14.09□□□□□ -0.15
Ercc1-201ENSMUST00000003645 Rabgef1Q9JM13 491 aa14.09□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms