RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ITM2AO43736 263 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 NUDT21O43809 227 aaKnown RBP9.03□□□□□ -0.96
PHGDH-228ENST00000641847 HSPA4LO95757 839 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 MLYCDO95822 493 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 CHRM5P08912 532 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-228ENST00000641847 TYRP1P17643 537 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 WT1P19544 449 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-228ENST00000641847 ITIH1P19827 911 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 PSMB5P28074 263 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 ARL1P40616 181 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-228ENST00000641847 SLC1A6P48664 564 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 NAA20P61599 178 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 CDC16Q13042 620 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 ARL13AQ5H913 290 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-228ENST00000641847 PHF19Q5T6S3 580 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 LCTLQ6UWM7 567 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 ZNF438Q7Z4V0 828 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 TMPRSS11BQ86T26 416 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 CUZD1Q86UP6 607 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 OOSP2Q86WS3 158 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 AGAP11Q8TF27 550 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 APOBEC4Q8WW27 367 aaKnown RBP9.03□□□□□ -0.96
PHGDH-228ENST00000641847 RSC1A1Q92681 617 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 KIAA1143Q96AT1 154 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-228ENST00000641847 CNDP1Q96KN2 507 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 MIPEPQ99797 713 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 TRMOQ9BU70 441 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 ACAT2Q9BWD1 397 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 SHCBP1LQ9BZQ2 653 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 PCBD2Q9H0N5 130 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 NOL11Q9H8H0 719 aaKnown RBP9.03□□□□□ -0.96
PHGDH-228ENST00000641847 ZNF395Q9H8N7 513 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-228ENST00000641847 IPPKQ9H8X2 491 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 ZBTB26Q9HCK0 441 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 SEMA4BQ9NPR2 832 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-228ENST00000641847 INTS7Q9NVH2 962 aaKnown RBP9.03□□□□□ -0.96
PHGDH-228ENST00000641847 SPHK1Q9NYA1 384 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 GPRC5BQ9NZH0 403 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 FOXJ2Q9P0K8 574 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 LRIT1Q9P2V4 623 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 TAC3Q9UHF0 121 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 SH2B3Q9UQQ2 575 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 STK38LQ9Y2H1 464 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 DYRK1BQ9Y463 629 aa9.03□□□□□ -0.96
PHGDH-228ENST00000641847 KIF26BQ2KJY2 2108 aa9.02□□□□□ -0.96
PHGDH-228ENST00000641847 PIPSLA2A3N6 862 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 OR5K3A6NET4 321 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 ISM1B1AKI9 464 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 E7EQ34 232 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 PPP6CO00743 305 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 UBFD1O14562 309 aaKnown RBP9.02□□□□□ -0.97
PHGDH-228ENST00000641847 SNNO75324 88 aaPredicted RBP9.02□□□□□ -0.97
PHGDH-228ENST00000641847 KATNA1O75449 491 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 UBXN7O94888 489 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 CCNDBP1O95273 360 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 DDAH2O95865 285 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 OTCP00480 354 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 VIMP08670 466 aaKnown RBP9.02□□□□□ -0.97
PHGDH-228ENST00000641847 GLB1P16278 677 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 EPB42P16452 691 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 EPORP19235 508 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 POLR2CP19387 275 aaPredicted RBP9.02□□□□□ -0.97
PHGDH-228ENST00000641847 MPSTP25325 297 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 LSP1P33241 339 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 CAPZBP47756 277 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 PPM1FP49593 454 aaPredicted RBP9.02□□□□□ -0.97
PHGDH-228ENST00000641847 CCNG1P51959 295 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 EPHA4P54764 986 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 OCRLQ01968 901 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 PRKAA1Q13131 559 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 NR1D2Q14995 579 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 ICE2Q659A1 982 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 ARMC6Q6NXE6 501 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 KLHL35Q6PF15 583 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 FAM47EQ6ZV65 393 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 GPRIN3Q6ZVF9 776 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 ADGRF3Q8IZF5 1079 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 Q8N9G6 341 aaPredicted RBP9.02□□□□□ -0.97
PHGDH-228ENST00000641847 GALNT11Q8NCW6 608 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 OR52B6Q8NGF0 335 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 AGR3Q8TD06 166 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 SLC5A11Q8WWX8 675 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 ATP6V1E2Q96A05 226 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 ABHD17AQ96GS6 310 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 C7orf26Q96N11 449 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 CDK15Q96Q40 435 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 ZNF382Q96SR6 550 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 HAUS8Q9BT25 410 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 EFHD1Q9BUP0 239 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 C20orf27Q9GZN8 174 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 ZMYND15Q9H091 742 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 ACTR8Q9H981 624 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 EML4Q9HC35 981 aaKnown RBP9.02□□□□□ -0.97
PHGDH-228ENST00000641847 MID1IP1Q9NPA3 183 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 SLCO1B3Q9NPD5 702 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 THAP1Q9NVV9 213 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 HRASLS2Q9NWW9 162 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 ACTR10Q9NZ32 417 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 RP1P56715 2156 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 CACNA1DQ01668 2161 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms