RNA–Protein interactions for RNA: ENST00000641603.1

SCN1A-220, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

BASIC

Gene SCN1A, Length 12,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-220ENST00000641603 NFICP08651 508 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 FSHRP23945 695 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 CALCRP30988 508 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 GGT2P36268 569 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 NPRL3Q12980 569 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 ARMC12Q5T9G4 340 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 ISLR2Q6UXK2 745 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 ACOT1Q86TX2 421 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 SEMA6DQ8NFY4 1073 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 TMEM174Q8WUU8 243 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 UROC1Q96N76 676 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 FCRL5Q96RD9 977 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 MED18Q9BUE0 208 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 SLC27A6Q9Y2P4 619 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 LOC285095A0A1B0GVY8 99 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 OR6A2O95222 327 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 ADRB1P08588 477 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 PRKCAP17252 672 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 CHRNB2P17787 502 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 ETV4P43268 484 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 CDH12P55289 794 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 FBXW4P57775 412 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 TAS2R41P59536 307 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 MBTD1Q05BQ5 628 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 MFSD10Q14728 455 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 DPY19L2P1Q6NXN4 242 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 OR10R2Q8NGX6 335 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 ZNF778Q96MU6 729 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 ZFP3Q96NJ6 502 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 SAMD11Q96NU1 681 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 DOK1Q99704 481 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 TKTL2Q9H0I9 626 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 AKTIPQ9H8T0 292 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 ERVMER34-1Q9H9K5 563 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 MGAT4CQ9UBM8 478 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 A0A1W2PRQ8 180 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 MAFO75444 373 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-220ENST00000641603 RCBTB2O95199 551 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 IGSF6O95976 241 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 RNH1P13489 461 aaKnown RBP4.54□□□□□ -1.68
SCN1A-220ENST00000641603 HOXD13P35453 343 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 GPR143P51810 404 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 SPOCK1Q08629 439 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 RIN1Q13671 783 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 KCNC3Q14003 757 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 Q3ZCU0 254 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 ZNF529Q6P280 563 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 FAM111BQ6SJ93 734 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 XYLT1Q86Y38 959 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 DEFB106AQ8N104 65 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 SYNPOQ8N3V7 929 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 PARP16Q8N5Y8 322 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 NEIL3Q8TAT5 605 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 ELP5Q8TE02 316 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 COPS5Q92905 334 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 ZNF566Q969W8 418 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 ZNF251Q9BRH9 671 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 KIAA0355O15063 1070 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 STAU1O95793 577 aaKnown RBP4.54□□□□□ -1.68
SCN1A-220ENST00000641603 DARSP14868 501 aaKnown RBP4.54□□□□□ -1.68
SCN1A-220ENST00000641603 PRKXP51817 358 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 RAG2P55895 527 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 ARHGAP1Q07960 439 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 BAATQ14032 418 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-220ENST00000641603 TATDN3Q17R31 274 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 SLC35F3Q8IY50 421 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 SLC7A5P1Q8MH63 180 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 LNX2Q8N448 690 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 ARL14Q8N4G2 192 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 DNAJC22Q8N4W6 341 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 YIPF7Q8N8F6 280 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 OR10A6Q8NH74 314 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 MAPK15Q8TD08 544 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 SNX33Q8WV41 574 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 ABRACLQ9P1F3 81 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 ERVK-18Q9QC07 812 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 ATRNL1Q5VV63 1379 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 SLIT2O94813 1529 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 IQCMA0A1B0GVH7 501 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 HOXA2O43364 376 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 HSD17B2P37059 387 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 RGS8P57771 180 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-220ENST00000641603 SP140Q13342 867 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 MEF2DQ14814 521 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 RTL6Q6ICC9 239 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 GPR153Q6NV75 609 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 MFSD6LQ8IWD5 586 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 C10orf53Q8N6V4 93 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 OR51D1Q8NGF3 324 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 ZFP90Q8TF47 636 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 L3HYPDHQ96EM0 354 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 PRMT6Q96LA8 375 aaPredicted RBP4.54□□□□□ -1.68
SCN1A-220ENST00000641603 PCDHAC1Q9H158 963 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 TRAPPC4Q9Y296 219 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 RNF215Q9Y6U7 377 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 TCRBV7S2A1N4TA0A589 114 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 F8W036 122 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 CYB561D2O14569 222 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 CA12O43570 354 aa4.54□□□□□ -1.68
SCN1A-220ENST00000641603 CILPO75339 1184 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms