RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 USP50Q70EL3 339 aaPredicted RBP13.31□□□□□ -0.28
SCARB2-227ENST00000640957 THEM5Q8N1Q8 247 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 DNAJC22Q8N4W6 341 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 MDGA1Q8NFP4 955 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 OR9Q1Q8NGQ5 310 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 TSPEARQ8WU66 669 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 ZNF566Q969W8 418 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 SEPT5Q99719 369 aaPredicted RBP13.31□□□□□ -0.28
SCARB2-227ENST00000640957 BOCQ9BWV1 1114 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 ACOXLQ9NUZ1 547 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 MCUBQ9NWR8 336 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 ELOVL2Q9NXB9 296 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 WWOXQ9NZC7 414 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 COMMD3Q9UBI1 195 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 PSORS1C1Q9UIG5 152 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 LOC102723532A0A0G2JNH3 316 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 CLCA1A8K7I4 914 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 PLD2O14939 933 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 BNIP3LO60238 219 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 CDRT1O95170 752 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 APEX1P27695 318 aaKnown RBP13.31□□□□□ -0.28
SCARB2-227ENST00000640957 FAPQ12884 760 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 FADDQ13158 208 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 FXNQ16595 210 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 TATDN3Q17R31 274 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 TOR2AQ5JU69 321 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 TIGD7Q6NT04 549 aaPredicted RBP13.31□□□□□ -0.28
SCARB2-227ENST00000640957 ZFP41Q8N8Y5 198 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 SYT14Q8NB59 555 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 OR7D4Q8NG98 312 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 TRIM63Q969Q1 353 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 MRM3Q9HC36 420 aaKnown RBP13.31□□□□□ -0.28
SCARB2-227ENST00000640957 DNAJC27Q9NZQ0 273 aa13.31□□□□□ -0.28
SCARB2-227ENST00000640957 SLC35F4A4IF30 521 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 HMX3A6NHT5 357 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 B4DXG7 233 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 ARHGEF9O43307 516 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 SBF1O95248 1867 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 SYPP08247 313 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 ODC1P11926 461 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 SIP14410 1827 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 CTPS1P17812 591 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 WARSP23381 471 aaKnown RBP13.3□□□□□ -0.28
SCARB2-227ENST00000640957 OR1E1P30953 314 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 RNASE12Q5GAN4 147 aaKnown RBP13.3□□□□□ -0.28
SCARB2-227ENST00000640957 GHDCQ8N2G8 530 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 STK40Q8N2I9 435 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 ATAD1Q8NBU5 361 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 SIMC1Q8NDZ2 872 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 GRPEL2Q8TAA5 225 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 LRRC20Q8TCA0 184 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 FAM193BQ96PV7 902 aaPredicted RBP13.3□□□□□ -0.28
SCARB2-227ENST00000640957 CCNB1IP1Q9NPC3 277 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 FABP12A6NFH5 140 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 ARNTLO00327 626 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 PLOD3O60568 738 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 F2P00734 622 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 CDK1P06493 297 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 PKMP14618 531 aaKnown RBP13.3□□□□□ -0.28
SCARB2-227ENST00000640957 FPR1P21462 350 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 SSTR2P30874 369 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 GNPDA1P46926 289 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 MAN2A2P49641 1150 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 CDC42EP1Q00587 391 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 COL9A2Q14055 689 aaPredicted RBP13.3□□□□□ -0.28
SCARB2-227ENST00000640957 UGT8Q16880 541 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 CTSL3PQ5NE16 218 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 C10orf120Q5SQS8 335 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 TMC8Q8IU68 726 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 CELF5Q8N6W0 485 aaKnown RBP13.3□□□□□ -0.28
SCARB2-227ENST00000640957 CD200R1Q8TD46 325 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 MS4A4AQ96JQ5 239 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 FRMD6Q96NE9 622 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 SGIP1Q9BQI5 828 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 DYRK4Q9NR20 520 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 HEBP1Q9NRV9 189 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 PPT2Q9UMR5 302 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 KPNA5O15131 536 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 CYP17A1P05093 508 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 SSX1Q16384 188 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 ALKAL1Q6UXT8 129 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 LINGO4Q6UY18 593 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 WDR53Q7Z5U6 358 aaPredicted RBP13.3□□□□□ -0.28
SCARB2-227ENST00000640957 MYDGFQ969H8 173 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 DACT3Q96B18 629 aaPredicted RBP13.3□□□□□ -0.28
SCARB2-227ENST00000640957 COPS8Q99627 209 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 DHRS9Q9BPW9 319 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 CRISPLD1Q9H336 500 aa13.3□□□□□ -0.28
SCARB2-227ENST00000640957 A0A1W2PQL4 384 aaPredicted RBP13.29□□□□□ -0.28
SCARB2-227ENST00000640957 CLIC1O00299 241 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 GABRDO14764 452 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 EVI2BP34910 448 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 GPC1P35052 558 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 HYAL2Q12891 473 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 HNRNPA0Q13151 305 aaKnown RBP13.29□□□□□ -0.28
SCARB2-227ENST00000640957 LRRC32Q14392 662 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 EIF3MQ7L2H7 374 aaKnown RBP13.29□□□□□ -0.28
SCARB2-227ENST00000640957 CDH24Q86UP0 819 aa13.29□□□□□ -0.28
SCARB2-227ENST00000640957 MEX3DQ86XN8 651 aaKnown RBP13.29□□□□□ -0.28
SCARB2-227ENST00000640957 KLHDC9Q8NEP7 349 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms