RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 NACC2Q96BF6 587 aa11.01□□□□□ -0.65
MECP2-226ENST00000640414 THOC3Q96J01 351 aaKnown RBP11.01□□□□□ -0.65
MECP2-226ENST00000640414 C12orf66Q96MD2 445 aa11.01□□□□□ -0.65
MECP2-226ENST00000640414 BIRC8Q96P09 236 aa11.01□□□□□ -0.65
MECP2-226ENST00000640414 VPS35Q96QK1 796 aa11.01□□□□□ -0.65
MECP2-226ENST00000640414 LMF1Q96S06 567 aa11.01□□□□□ -0.65
MECP2-226ENST00000640414 NDNQ99608 321 aa11.01□□□□□ -0.65
MECP2-226ENST00000640414 TTC1Q99614 292 aa11.01□□□□□ -0.65
MECP2-226ENST00000640414 COPS8Q99627 209 aa11.01□□□□□ -0.65
MECP2-226ENST00000640414 GPR22Q99680 433 aa11.01□□□□□ -0.65
MECP2-226ENST00000640414 SPRTNQ9H040 489 aaPredicted RBP11.01□□□□□ -0.65
MECP2-226ENST00000640414 WWP1Q9H0M0 922 aa11.01□□□□□ -0.65
MECP2-226ENST00000640414 P2RY12Q9H244 342 aa11.01□□□□□ -0.65
MECP2-226ENST00000640414 CXXC4Q9H2H0 198 aa11.01□□□□□ -0.65
MECP2-226ENST00000640414 DHCR7Q9UBM7 475 aaKnown RBP11.01□□□□□ -0.65
MECP2-226ENST00000640414 TINAGQ9UJW2 476 aa11.01□□□□□ -0.65
MECP2-226ENST00000640414 VPS9D1Q9Y2B5 631 aa11.01□□□□□ -0.65
MECP2-226ENST00000640414 VWA7Q9Y334 891 aa11.01□□□□□ -0.65
MECP2-226ENST00000640414 HS3ST3B1Q9Y662 390 aa11.01□□□□□ -0.65
MECP2-226ENST00000640414 AP1M2Q9Y6Q5 423 aa11.01□□□□□ -0.65
MECP2-226ENST00000640414 PRRC2AP48634 2157 aaKnown RBP11.01□□□□□ -0.65
MECP2-226ENST00000640414 GSAPA4D1B5 854 aa11□□□□□ -0.65
MECP2-226ENST00000640414 PRMT5O14744 637 aaPredicted RBP11□□□□□ -0.65
MECP2-226ENST00000640414 PFDN6O15212 129 aa11□□□□□ -0.65
MECP2-226ENST00000640414 MAP3K7O43318 606 aa11□□□□□ -0.65
MECP2-226ENST00000640414 HCRTR1O43613 425 aa11□□□□□ -0.65
MECP2-226ENST00000640414 OR2B3O76000 313 aa11□□□□□ -0.65
MECP2-226ENST00000640414 WISP2O76076 250 aa11□□□□□ -0.65
MECP2-226ENST00000640414 KRT15P19012 456 aa11□□□□□ -0.65
MECP2-226ENST00000640414 CNTFP26441 200 aa11□□□□□ -0.65
MECP2-226ENST00000640414 DNAJA1P31689 397 aaKnown RBP11□□□□□ -0.65
MECP2-226ENST00000640414 PPARGP37231 505 aaPredicted RBP11□□□□□ -0.65
MECP2-226ENST00000640414 TNFSF10P50591 281 aa11□□□□□ -0.65
MECP2-226ENST00000640414 CASP6P55212 293 aa11□□□□□ -0.65
MECP2-226ENST00000640414 ADARP55265 1226 aaKnown RBP11□□□□□ -0.65
MECP2-226ENST00000640414 CDKN2DP55273 166 aa11□□□□□ -0.65
MECP2-226ENST00000640414 TAS2R39P59534 338 aa11□□□□□ -0.65
MECP2-226ENST00000640414 PPP2R2AP63151 447 aa11□□□□□ -0.65
MECP2-226ENST00000640414 TIAL1Q01085 375 aaKnown RBP eCLIP11□□□□□ -0.65
MECP2-226ENST00000640414 RBPJQ06330 500 aa11□□□□□ -0.65
MECP2-226ENST00000640414 ITIH4Q14624 930 aa11□□□□□ -0.65
MECP2-226ENST00000640414 NKAIN1Q4KMZ8 207 aa11□□□□□ -0.65
MECP2-226ENST00000640414 TTMPQ5BVD1 217 aa11□□□□□ -0.65
MECP2-226ENST00000640414 CTSL3PQ5NE16 218 aa11□□□□□ -0.65
MECP2-226ENST00000640414 LDLRAP1Q5SW96 308 aa11□□□□□ -0.65
MECP2-226ENST00000640414 HECTD2Q5U5R9 776 aa11□□□□□ -0.65
MECP2-226ENST00000640414 AGBL2Q5U5Z8 902 aa11□□□□□ -0.65
MECP2-226ENST00000640414 METRNLQ641Q3 311 aa11□□□□□ -0.65
MECP2-226ENST00000640414 SH2D5Q6ZV89 423 aa11□□□□□ -0.65
MECP2-226ENST00000640414 NCCRP1Q6ZVX7 275 aaPredicted RBP11□□□□□ -0.65
MECP2-226ENST00000640414 GPATCH11Q8N954 259 aa11□□□□□ -0.65
MECP2-226ENST00000640414 RASGEF1AQ8N9B8 481 aa11□□□□□ -0.65
MECP2-226ENST00000640414 CHDHQ8NE62 594 aaPredicted RBP11□□□□□ -0.65
MECP2-226ENST00000640414 DDHD1Q8NEL9 900 aa11□□□□□ -0.65
MECP2-226ENST00000640414 SPDYE1Q8NFV5 336 aaPredicted RBP11□□□□□ -0.65
MECP2-226ENST00000640414 GDAP1Q8TB36 358 aa11□□□□□ -0.65
MECP2-226ENST00000640414 NRGNQ92686 78 aa11□□□□□ -0.65
MECP2-226ENST00000640414 TLCD1Q96CP7 247 aa11□□□□□ -0.65
MECP2-226ENST00000640414 MTBPQ96DY7 904 aa11□□□□□ -0.65
MECP2-226ENST00000640414 NRTNQ99748 197 aa11□□□□□ -0.65
MECP2-226ENST00000640414 OLFM1Q99784 485 aa11□□□□□ -0.65
MECP2-226ENST00000640414 AARSD1Q9BTE6 412 aaKnown RBP11□□□□□ -0.65
MECP2-226ENST00000640414 CAB39LQ9H9S4 337 aa11□□□□□ -0.65
MECP2-226ENST00000640414 FAM60AQ9NP50 221 aa11□□□□□ -0.65
MECP2-226ENST00000640414 DLL4Q9NR61 685 aa11□□□□□ -0.65
MECP2-226ENST00000640414 SLC22A11Q9NSA0 550 aa11□□□□□ -0.65
MECP2-226ENST00000640414 PLA2G3Q9NZ20 509 aa11□□□□□ -0.65
MECP2-226ENST00000640414 ABI3Q9P2A4 366 aa11□□□□□ -0.65
MECP2-226ENST00000640414 TNFRSF10DQ9UBN6 386 aa11□□□□□ -0.65
MECP2-226ENST00000640414 SLC39A10Q9ULF5 831 aa11□□□□□ -0.65
MECP2-226ENST00000640414 RPH3AQ9Y2J0 694 aaPredicted RBP11□□□□□ -0.65
MECP2-226ENST00000640414 MED16Q9Y2X0 877 aa11□□□□□ -0.65
MECP2-226ENST00000640414 TRAV17A0A0B4J275 112 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 FAM95CA0A1B0GW59 222 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 OR2AG2A6NM03 316 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 IQCF5A8MTL0 148 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 MATN2O00339 956 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 BTN3A3O00478 584 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 SGTAO43765 313 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 ESR1P03372 595 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 ALDOAP04075 364 aaKnown RBP10.99□□□□□ -0.65
MECP2-226ENST00000640414 CTSBP07858 339 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 ATP1B2P14415 290 aaPredicted RBP10.99□□□□□ -0.65
MECP2-226ENST00000640414 PKMP14618 531 aaKnown RBP10.99□□□□□ -0.65
MECP2-226ENST00000640414 CREB1P16220 341 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 MSH3P20585 1137 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 SAT1P21673 171 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 RPS3P23396 243 aaKnown RBP eCLIP10.99□□□□□ -0.65
MECP2-226ENST00000640414 NSG1P42857 185 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 POU4F1Q01851 419 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 LTBQ06643 244 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 FOXD4Q12950 439 aaPredicted RBP10.99□□□□□ -0.65
MECP2-226ENST00000640414 USP10Q14694 798 aaKnown RBP10.99□□□□□ -0.65
MECP2-226ENST00000640414 DEFB110Q30KQ9 67 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 TUBB8Q3ZCM7 444 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 TAOK1Q7L7X3 1001 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 TRABD2AQ86V40 505 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 EXOC3L1Q86VI1 746 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 GOLGA6L1Q8N7Z2 621 aa10.99□□□□□ -0.65
MECP2-226ENST00000640414 HEXDCQ8WVB3 486 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms