RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 SF3A3Q12874 501 aaKnown RBP eCLIP13.14□□□□□ -0.31
HLA-C-210ENST00000640219 PRKG2Q13237 762 aa13.14□□□□□ -0.31
HLA-C-210ENST00000640219 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.14□□□□□ -0.31
HLA-C-210ENST00000640219 LRRC8BQ6P9F7 803 aa13.14□□□□□ -0.31
HLA-C-210ENST00000640219 TBC1D1Q86TI0 1168 aaPredicted RBP13.14□□□□□ -0.31
HLA-C-210ENST00000640219 VRK3Q8IV63 474 aa13.14□□□□□ -0.31
HLA-C-210ENST00000640219 TRIM42Q8IWZ5 723 aa13.14□□□□□ -0.31
HLA-C-210ENST00000640219 GPR135Q8IZ08 494 aa13.14□□□□□ -0.31
HLA-C-210ENST00000640219 ELMO1Q92556 727 aa13.14□□□□□ -0.31
HLA-C-210ENST00000640219 SPOCK3Q9BQ16 436 aa13.14□□□□□ -0.31
HLA-C-210ENST00000640219 CATSPERZQ9NTU4 200 aa13.14□□□□□ -0.31
HLA-C-210ENST00000640219 POMT2Q9UKY4 750 aa13.14□□□□□ -0.31
HLA-C-210ENST00000640219 CDYLQ9Y232 598 aa13.14□□□□□ -0.31
HLA-C-210ENST00000640219 DNMT3AQ9Y6K1 912 aaPredicted RBP13.14□□□□□ -0.31
HLA-C-210ENST00000640219 HNRNPCL1O60812 293 aaKnown RBP13.13□□□□□ -0.31
HLA-C-210ENST00000640219 VAPBO95292 243 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 CLDN14O95500 239 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 INHBAP08476 426 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 ST6GAL1P15907 406 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 GCAP28676 217 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 WDR4P57081 412 aaKnown RBP13.13□□□□□ -0.31
HLA-C-210ENST00000640219 GPX6P59796 221 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 SARNPP82979 210 aaKnown RBP13.13□□□□□ -0.31
HLA-C-210ENST00000640219 CBLBQ13191 982 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 FASTKD3Q14CZ7 662 aaKnown RBP13.13□□□□□ -0.31
HLA-C-210ENST00000640219 FASTKD1Q53R41 847 aaKnown RBP13.13□□□□□ -0.31
HLA-C-210ENST00000640219 LINC00696Q6ZRV3 163 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 TMEM151BQ8IW70 566 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 C4orf33Q8N1A6 199 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 OR4E2Q8NGC2 313 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 OR5AR1Q8NGP9 310 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 ZFPM2Q8WW38 1151 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 MRRFQ96E11 262 aaKnown RBP13.13□□□□□ -0.31
HLA-C-210ENST00000640219 TAAR6Q96RI8 345 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 FERD3LQ96RJ6 166 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 PAFAH2Q99487 392 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 LHPPQ9H008 270 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 KLHL25Q9H0H3 589 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 BFARQ9NZS9 450 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 BAIAP2L1Q9UHR4 511 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 RUVBL2Q9Y230 463 aaKnown RBP13.13□□□□□ -0.31
HLA-C-210ENST00000640219 CCDC88CQ9P219 2028 aa13.13□□□□□ -0.31
HLA-C-210ENST00000640219 CNTRLQ7Z7A1 2325 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 PCM1Q15154 2024 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 FAM221AA4D161 298 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 MATN2O00339 956 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 CD3EAPO15446 510 aaKnown RBP13.12□□□□□ -0.31
HLA-C-210ENST00000640219 EDF1O60869 148 aaKnown RBP13.12□□□□□ -0.31
HLA-C-210ENST00000640219 ATP6V1G2O95670 118 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 ESRRAP11474 423 aaPredicted RBP13.12□□□□□ -0.31
HLA-C-210ENST00000640219 KRT4P19013 534 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 SSTR1P30872 391 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 CCR7P32248 378 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 RPA3P35244 121 aaPredicted RBP13.12□□□□□ -0.31
HLA-C-210ENST00000640219 NSG1P42857 185 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 CASP6P55212 293 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 NCALDP61601 193 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 RBPJQ06330 500 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 SLC9A5Q14940 896 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 CDSNQ15517 529 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 SPDYAQ5MJ70 313 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 CTSL3PQ5NE16 218 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 MRPL14Q6P1L8 145 aaKnown RBP13.12□□□□□ -0.31
HLA-C-210ENST00000640219 CASC4Q6P4E1 433 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 ISLR2Q6UXK2 745 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 PACS1Q6VY07 963 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 ZNF75CPQ92670 426 aaPredicted RBP13.12□□□□□ -0.31
HLA-C-210ENST00000640219 N4BP2L2Q92802 583 aaPredicted RBP13.12□□□□□ -0.31
HLA-C-210ENST00000640219 NACC2Q96BF6 587 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 ZNF669Q96BR6 464 aaPredicted RBP13.12□□□□□ -0.31
HLA-C-210ENST00000640219 LRRC39Q96DD0 335 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 LRRC37BQ96QE4 947 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 IL22Q9GZX6 179 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 IQCGQ9H095 443 aaKnown RBP13.12□□□□□ -0.31
HLA-C-210ENST00000640219 VPS11Q9H270 941 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 KIR3DX1Q9H7L2 352 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 SEC14L3Q9UDX4 400 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 ACSL5Q9ULC5 683 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 SOX13Q9UN79 622 aa13.12□□□□□ -0.31
HLA-C-210ENST00000640219 GSAPA4D1B5 854 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 FOXO6A8MYZ6 492 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 BTN3A3O00478 584 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 TYROBPO43914 113 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 TPBGLP0DKB5 382 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 MMP11P24347 488 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 PRDX3P30048 256 aaKnown RBP13.11□□□□□ -0.31
HLA-C-210ENST00000640219 ELK3P41970 407 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 MAGEA6P43360 314 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 NPY2RP49146 381 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 MFAP5Q13361 173 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 KRT33BQ14525 404 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 INAQ16352 499 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 SPRED3Q2MJR0 410 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 MSS51Q4VC12 460 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 SYTL3Q4VX76 610 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 FAAH2Q6GMR7 532 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 RHBDD2Q6NTF9 364 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 CDHR3Q6ZTQ4 885 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 FAM47EQ6ZV65 393 aa13.11□□□□□ -0.31
HLA-C-210ENST00000640219 TRIM73Q86UV7 250 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms