RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 USP9XQ93008 2570 aaPredicted RBP16.82■□□□□ 0.28
PNKP-230ENST00000638016 OR2W5A6NFC9 320 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 IDSB3KWA1 339 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 B3GALT4O96024 378 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 ANXA5P08758 320 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 HIST1H2AGP0C0S8 130 aaPredicted RBP16.81■□□□□ 0.28
PNKP-230ENST00000638016 COX6A1P12074 109 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 ACPPP15309 386 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 HIST1H2ADP20671 130 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 SOX8P57073 446 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 RPS15AP62244 130 aaKnown RBP16.81■□□□□ 0.28
PNKP-230ENST00000638016 GARNL3Q5VVW2 1013 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 CAPN13Q6MZZ7 669 aaPredicted RBP16.81■□□□□ 0.28
PNKP-230ENST00000638016 SLC26A11Q86WA9 606 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 SPATA6LQ8N4H0 392 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 PYROXD1Q8WU10 500 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 PNPLA2Q96AD5 504 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 FBXL8Q96CD0 374 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 MVB12AQ96EY5 273 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 THOC3Q96J01 351 aaKnown RBP16.81■□□□□ 0.28
PNKP-230ENST00000638016 VPS39Q96JC1 886 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 HIST1H2AHQ96KK5 128 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 HIST1H2AJQ99878 128 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 H2AFJQ9BTM1 129 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 SLAMF7Q9NQ25 335 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 HCN3Q9P1Z3 774 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 WHRNQ9P202 907 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 C5AR2Q9P296 337 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 MAP10Q9P2G4 905 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 CDC14AQ9UNH5 594 aa16.81■□□□□ 0.28
PNKP-230ENST00000638016 MTO1Q9Y2Z2 717 aaKnown RBP16.81■□□□□ 0.28
PNKP-230ENST00000638016 ZNF860A6NHJ4 632 aa16.8■□□□□ 0.28
PNKP-230ENST00000638016 SGK494L7N484 410 aa16.8■□□□□ 0.28
PNKP-230ENST00000638016 MAP2K7O14733 419 aa16.8■□□□□ 0.28
PNKP-230ENST00000638016 IGHEP01854 428 aa16.8■□□□□ 0.28
PNKP-230ENST00000638016 C1QAP02745 245 aa16.8■□□□□ 0.28
PNKP-230ENST00000638016 EMP2P54851 167 aa16.8■□□□□ 0.28
PNKP-230ENST00000638016 GPX6P59796 221 aa16.8■□□□□ 0.28
PNKP-230ENST00000638016 TSNQ15631 228 aaKnown RBP16.8■□□□□ 0.28
PNKP-230ENST00000638016 ATG9BQ674R7 924 aa16.8■□□□□ 0.28
PNKP-230ENST00000638016 TMEM214Q6NUQ4 689 aaKnown RBP16.8■□□□□ 0.28
PNKP-230ENST00000638016 ASPGQ86U10 573 aa16.8■□□□□ 0.28
PNKP-230ENST00000638016 PDSS2Q86YH6 399 aa16.8■□□□□ 0.28
PNKP-230ENST00000638016 NEIL2Q969S2 332 aa16.8■□□□□ 0.28
PNKP-230ENST00000638016 NACC2Q96BF6 587 aa16.8■□□□□ 0.28
PNKP-230ENST00000638016 RBCK1Q9BYM8 510 aa16.8■□□□□ 0.28
PNKP-230ENST00000638016 PCBD2Q9H0N5 130 aa16.8■□□□□ 0.28
PNKP-230ENST00000638016 RHOJQ9H4E5 214 aa16.8■□□□□ 0.28
PNKP-230ENST00000638016 PRRC2CQ9Y520 2896 aaKnown RBP16.79■□□□□ 0.28
PNKP-230ENST00000638016 KCNE1BA0A087WTH5 132 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 TCRBV9S1A1TA0A576 114 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 PHGDHO43175 533 aaKnown RBP16.79■□□□□ 0.28
PNKP-230ENST00000638016 DNAJB6O75190 326 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 KLHL18O94889 574 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 ALPPP05187 535 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 PLTPP55058 493 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 AP1S2P56377 157 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 CALCOCO2Q13137 446 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 CBLBQ13191 982 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 MRPL49Q13405 166 aaKnown RBP16.79■□□□□ 0.28
PNKP-230ENST00000638016 FAM53BQ14153 422 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 ZDHHC24Q6UX98 284 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 CUZD1Q86UP6 607 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 CISD2Q8N5K1 135 aaKnown RBP16.79■□□□□ 0.28
PNKP-230ENST00000638016 EFCAB3Q8N7B9 438 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 MFSD9Q8NBP5 474 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 BBOF1Q8ND07 529 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 FBXO25Q8TCJ0 367 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 SNRNP40Q96DI7 357 aaKnown RBP16.79■□□□□ 0.28
PNKP-230ENST00000638016 TM4SF19Q96DZ7 209 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 PDLIM5Q96HC4 596 aaKnown RBP16.79■□□□□ 0.28
PNKP-230ENST00000638016 MKKSQ9NPJ1 570 aaPredicted RBP16.79■□□□□ 0.28
PNKP-230ENST00000638016 C14orf105Q9NVL8 296 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 B3GNT3Q9Y2A9 372 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 NTNG1Q9Y2I2 539 aa16.79■□□□□ 0.28
PNKP-230ENST00000638016 HIVEP3Q5T1R4 2406 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 IGHV3-20A0A0C4DH32 117 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 ESYT3A0FGR9 886 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 CLEC18AA5D8T8 446 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 TCP11X1B4DZS4 312 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 TXNDC9O14530 226 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 PRPF4O43172 522 aaKnown RBP eCLIP16.78■□□□□ 0.28
PNKP-230ENST00000638016 OR1F1O43749 312 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 RDH16O75452 317 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 FAM155BO75949 473 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 WISP3O95389 354 aaPredicted RBP16.78■□□□□ 0.28
PNKP-230ENST00000638016 HPP00738 406 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 HEXBP07686 556 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 ENO2P09104 434 aaPredicted RBP16.78■□□□□ 0.28
PNKP-230ENST00000638016 CCND1P24385 295 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 HRH2P25021 359 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 SLC7A5Q01650 507 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 EFTUD2Q15029 972 aaKnown RBP eCLIP16.78■□□□□ 0.28
PNKP-230ENST00000638016 NDUFA9Q16795 377 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 FBXO48Q5FWF7 155 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 IGFL3Q6UXB1 125 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 CLEC18BQ6UXF7 455 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 LINC00696Q6ZRV3 163 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 LANCL3Q6ZV70 420 aa16.78■□□□□ 0.28
PNKP-230ENST00000638016 MAATS1Q7Z4T9 603 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms