RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 CKAP4Q07065 602 aaKnown RBP17.47■□□□□ 0.39
CLN6-214ENST00000636314 KLC1Q07866 573 aa17.47■□□□□ 0.39
CLN6-214ENST00000636314 ILF2Q12905 390 aaKnown RBP17.47■□□□□ 0.39
CLN6-214ENST00000636314 ZNF460Q14592 562 aa17.47■□□□□ 0.39
CLN6-214ENST00000636314 MYBPC3Q14896 1274 aa17.47■□□□□ 0.39
CLN6-214ENST00000636314 NR6A1Q15406 480 aa17.47■□□□□ 0.39
CLN6-214ENST00000636314 NDUFA9Q16795 377 aa17.47■□□□□ 0.39
CLN6-214ENST00000636314 NKAPQ8N5F7 415 aaKnown RBP17.47■□□□□ 0.39
CLN6-214ENST00000636314 ATL1Q8WXF7 558 aa17.47■□□□□ 0.39
CLN6-214ENST00000636314 C19orf60Q96EN9 201 aa17.47■□□□□ 0.39
CLN6-214ENST00000636314 MMABQ96EY8 250 aaPredicted RBP17.47■□□□□ 0.39
CLN6-214ENST00000636314 PDLIM5Q96HC4 596 aaKnown RBP17.47■□□□□ 0.39
CLN6-214ENST00000636314 VPS39Q96JC1 886 aa17.47■□□□□ 0.39
CLN6-214ENST00000636314 SMAD5Q99717 465 aaKnown RBP17.47■□□□□ 0.39
CLN6-214ENST00000636314 YIPF2Q9BWQ6 316 aa17.47■□□□□ 0.39
CLN6-214ENST00000636314 ATP13A2Q9NQ11 1180 aa17.47■□□□□ 0.39
CLN6-214ENST00000636314 TXNDC16Q9P2K2 825 aa17.47■□□□□ 0.39
CLN6-214ENST00000636314 TRPC4Q9UBN4 977 aa17.47■□□□□ 0.39
CLN6-214ENST00000636314 ERRFI1Q9UJM3 462 aaPredicted RBP17.47■□□□□ 0.39
CLN6-214ENST00000636314 HS3ST3B1Q9Y662 390 aa17.47■□□□□ 0.39
CLN6-214ENST00000636314 A0A0A6YYC8 382 aaPredicted RBP17.46■□□□□ 0.39
CLN6-214ENST00000636314 NPEPPSL1A6NEC2 478 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 I3L1I5 382 aaPredicted RBP17.46■□□□□ 0.39
CLN6-214ENST00000636314 MASP2O00187 686 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 SOCS6O14544 535 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 KLHL41O60662 606 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 PIAS1O75925 651 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 GUCA1CO95843 209 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 STATHP02808 62 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 ZGLP1P0C6A0 271 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 GRK3P35626 688 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 SLC12A2P55011 1212 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 PLTPP55058 493 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 TAS2R39P59534 338 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 CSNK1G2P78368 415 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 CAV1Q03135 178 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 AIMP2Q13155 320 aaKnown RBP17.46■□□□□ 0.39
CLN6-214ENST00000636314 TUBB8Q3ZCM7 444 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 SBSNQ6UWP8 590 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 TMEM207Q6UWW9 146 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 ZNF572Q7Z3I7 529 aaPredicted RBP17.46■□□□□ 0.39
CLN6-214ENST00000636314 PYCR2Q96C36 320 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 FBXL8Q96CD0 374 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 THAP11Q96EK4 314 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 C16orf45Q96MC5 204 aaPredicted RBP17.46■□□□□ 0.39
CLN6-214ENST00000636314 PHACTR1Q9C0D0 580 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 SMYD2Q9NRG4 433 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 C14orf105Q9NVL8 296 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 IKZF3Q9UKT9 509 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 NOVA2Q9UNW9 492 aaKnown RBP17.46■□□□□ 0.39
CLN6-214ENST00000636314 LRBAP50851 2863 aa17.46■□□□□ 0.39
CLN6-214ENST00000636314 IGLV3-12A0A075B6K2 115 aa17.45■□□□□ 0.38
CLN6-214ENST00000636314 FEZF1A0PJY2 475 aa17.45■□□□□ 0.38
CLN6-214ENST00000636314 FFAR3O14843 346 aa17.45■□□□□ 0.38
CLN6-214ENST00000636314 GPR42O15529 346 aa17.45■□□□□ 0.38
CLN6-214ENST00000636314 ALOX12BO75342 701 aa17.45■□□□□ 0.38
CLN6-214ENST00000636314 ITGA3P26006 1051 aa17.45■□□□□ 0.38
CLN6-214ENST00000636314 FAM53BQ14153 422 aa17.45■□□□□ 0.38
CLN6-214ENST00000636314 VWA2Q5GFL6 755 aa17.45■□□□□ 0.38
CLN6-214ENST00000636314 KIRREL2Q6UWL6 708 aa17.45■□□□□ 0.38
CLN6-214ENST00000636314 VN1R4Q7Z5H5 301 aa17.45■□□□□ 0.38
CLN6-214ENST00000636314 CCDC25Q86WR0 208 aa17.45■□□□□ 0.38
CLN6-214ENST00000636314 ARHGEF39Q8N4T4 335 aa17.45■□□□□ 0.38
CLN6-214ENST00000636314 AMER3Q8N944 861 aa17.45■□□□□ 0.38
CLN6-214ENST00000636314 OR56A3Q8NH54 315 aa17.45■□□□□ 0.38
CLN6-214ENST00000636314 POPDC3Q9HBV1 291 aa17.45■□□□□ 0.38
CLN6-214ENST00000636314 GPAMQ9HCL2 828 aa17.45■□□□□ 0.38
CLN6-214ENST00000636314 C5AR2Q9P296 337 aa17.45■□□□□ 0.38
CLN6-214ENST00000636314 C3orf18Q9UK00 162 aa17.45■□□□□ 0.38
CLN6-214ENST00000636314 DOPEY1Q5JWR5 2465 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 KCNE1BA0A087WTH5 132 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 TCRBV9S1A1TA0A576 114 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 CDC7O00311 574 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 MAP2K7O14733 419 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 FOXS1O43638 330 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 IPO13O94829 963 aaKnown RBP17.44■□□□□ 0.38
CLN6-214ENST00000636314 LDLRP01130 860 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 ACPPP15309 386 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 NPPBP16860 134 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 SLC26A3P40879 764 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 BCL6P41182 706 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 AVPR1BP47901 424 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 CCR8P51685 355 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 PPP1R3AQ16821 1122 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 ZXDCQ2QGD7 858 aaPredicted RBP17.44■□□□□ 0.38
CLN6-214ENST00000636314 PLEKHN1Q494U1 663 aaPredicted RBP17.44■□□□□ 0.38
CLN6-214ENST00000636314 IRAK1BP1Q5VVH5 260 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 C8orf74Q6P047 294 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 FRA10AC1Q70Z53 315 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 ADAMTSL2Q86TH1 951 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 ASPGQ86U10 573 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 CEP97Q8IW35 865 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 IQCKQ8N0W5 287 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 CAMKVQ8NCB2 501 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 FBXO25Q8TCJ0 367 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 ANKRD7Q92527 254 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 SNRNP40Q96DI7 357 aaKnown RBP17.44■□□□□ 0.38
CLN6-214ENST00000636314 TSPAN17Q96FV3 270 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 C5orf34Q96MH7 638 aa17.44■□□□□ 0.38
CLN6-214ENST00000636314 CPNE1Q99829 537 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms