RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 STATHP02808 62 aa17■□□□□ 0.31
PNKP-225ENST00000636214 SERPINA7P05543 415 aa17■□□□□ 0.31
PNKP-225ENST00000636214 SLC35G6P0C7Q6 338 aa17■□□□□ 0.31
PNKP-225ENST00000636214 PRR35P0CG20 571 aa17■□□□□ 0.31
PNKP-225ENST00000636214 C8orf89P0DMQ9 161 aa17■□□□□ 0.31
PNKP-225ENST00000636214 ICAM2P13598 275 aa17■□□□□ 0.31
PNKP-225ENST00000636214 ELK3P41970 407 aa17■□□□□ 0.31
PNKP-225ENST00000636214 CDKN2DP55273 166 aa17■□□□□ 0.31
PNKP-225ENST00000636214 AP1S2P56377 157 aa17■□□□□ 0.31
PNKP-225ENST00000636214 MAT1AQ00266 395 aaKnown RBP17■□□□□ 0.31
PNKP-225ENST00000636214 Q0VFX4 171 aa17■□□□□ 0.31
PNKP-225ENST00000636214 SYT16Q17RD7 645 aa17■□□□□ 0.31
PNKP-225ENST00000636214 MINDY4Q4G0A6 757 aa17■□□□□ 0.31
PNKP-225ENST00000636214 MSS51Q4VC12 460 aa17■□□□□ 0.31
PNKP-225ENST00000636214 HP1BP3Q5SSJ5 553 aaPredicted RBP17■□□□□ 0.31
PNKP-225ENST00000636214 FAM180AQ6UWF9 173 aa17■□□□□ 0.31
PNKP-225ENST00000636214 LCTLQ6UWM7 567 aa17■□□□□ 0.31
PNKP-225ENST00000636214 MBOAT1Q6ZNC8 495 aa17■□□□□ 0.31
PNKP-225ENST00000636214 RIPOR1Q6ZS17 1223 aa17■□□□□ 0.31
PNKP-225ENST00000636214 ZCCHC10Q8TBK6 192 aa17■□□□□ 0.31
PNKP-225ENST00000636214 BRIX1Q8TDN6 353 aaKnown RBP17■□□□□ 0.31
PNKP-225ENST00000636214 LRRC39Q96DD0 335 aa17■□□□□ 0.31
PNKP-225ENST00000636214 NAPGQ99747 312 aaPredicted RBP17■□□□□ 0.31
PNKP-225ENST00000636214 KCNF1Q9H3M0 494 aa17■□□□□ 0.31
PNKP-225ENST00000636214 SCN3AQ9NY46 2000 aa17■□□□□ 0.31
PNKP-225ENST00000636214 ZFATQ9P243 1243 aa17■□□□□ 0.31
PNKP-225ENST00000636214 CSAG2Q9Y5P2 127 aa17■□□□□ 0.31
PNKP-225ENST00000636214 POLEQ07864 2286 aa17■□□□□ 0.31
PNKP-225ENST00000636214 ZGRF1Q86YA3 2104 aa17■□□□□ 0.31
PNKP-225ENST00000636214 DIDO1Q9BTC0 2240 aaKnown RBP17■□□□□ 0.31
PNKP-225ENST00000636214 KCNE1BA0A087WTH5 132 aa16.99■□□□□ 0.31
PNKP-225ENST00000636214 IGHV1-45A0A0A0MS14 117 aa16.99■□□□□ 0.31
PNKP-225ENST00000636214 CDH1P12830 882 aa16.99■□□□□ 0.31
PNKP-225ENST00000636214 SKP1P63208 163 aa16.99■□□□□ 0.31
PNKP-225ENST00000636214 CSNK1G2P78368 415 aa16.99■□□□□ 0.31
PNKP-225ENST00000636214 TEDDM1Q5T9Z0 273 aa16.99■□□□□ 0.31
PNKP-225ENST00000636214 HECTD2Q5U5R9 776 aa16.99■□□□□ 0.31
PNKP-225ENST00000636214 DUPD1Q68J44 220 aa16.99■□□□□ 0.31
PNKP-225ENST00000636214 ASPGQ86U10 573 aa16.99■□□□□ 0.31
PNKP-225ENST00000636214 SPNS2Q8IVW8 549 aa16.99■□□□□ 0.31
PNKP-225ENST00000636214 ZC3H7AQ8IWR0 971 aaKnown RBP16.99■□□□□ 0.31
PNKP-225ENST00000636214 SIRT6Q8N6T7 355 aa16.99■□□□□ 0.31
PNKP-225ENST00000636214 OR9A4Q8NGU2 314 aa16.99■□□□□ 0.31
PNKP-225ENST00000636214 SLC13A3Q8WWT9 602 aa16.99■□□□□ 0.31
PNKP-225ENST00000636214 MAGEB10Q96LZ2 347 aaPredicted RBP16.99■□□□□ 0.31
PNKP-225ENST00000636214 C5orf34Q96MH7 638 aa16.99■□□□□ 0.31
PNKP-225ENST00000636214 TUBB6Q9BUF5 446 aa16.99■□□□□ 0.31
PNKP-225ENST00000636214 SYNPO2LQ9H987 977 aa16.99■□□□□ 0.31
PNKP-225ENST00000636214 PLEKHB1Q9UF11 243 aaPredicted RBP16.99■□□□□ 0.31
PNKP-225ENST00000636214 VWA7Q9Y334 891 aa16.99■□□□□ 0.31
PNKP-225ENST00000636214 MRPS2Q9Y399 296 aaKnown RBP16.99■□□□□ 0.31
PNKP-225ENST00000636214 SAR1BQ9Y6B6 198 aa16.99■□□□□ 0.31
PNKP-225ENST00000636214 FEZF1A0PJY2 475 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 CCDC188H7C350 402 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 BMP10O95393 424 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 CBX6O95503 412 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 CYC1P08574 325 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 MYBL2P10244 700 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 IL1RNP18510 177 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 GABRB3P28472 473 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 CCR8P51685 355 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 ITGA8P53708 1063 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 PHKG1Q16816 387 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 C4orf17Q53FE4 359 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 VN1R4Q7Z5H5 301 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 ST6GALNAC3Q8NDV1 305 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 OR1N1Q8NGS0 311 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 SNF8Q96H20 258 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 MESP1Q9BRJ9 268 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 TRIM31Q9BZY9 425 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.98■□□□□ 0.31
PNKP-225ENST00000636214 HCN3Q9P1Z3 774 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 SLC17A6Q9P2U8 582 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 TEKT2Q9UIF3 430 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 SLC5A6Q9Y289 635 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 NOTCH2Q04721 2471 aa16.98■□□□□ 0.31
PNKP-225ENST00000636214 UTP20O75691 2785 aaKnown RBP16.98■□□□□ 0.31
PNKP-225ENST00000636214 DOPEY1Q5JWR5 2465 aa16.97■□□□□ 0.31
PNKP-225ENST00000636214 TRAV17A0A0B4J275 112 aa16.97■□□□□ 0.31
PNKP-225ENST00000636214 KLHL18O94889 574 aa16.97■□□□□ 0.31
PNKP-225ENST00000636214 GUCA1CO95843 209 aa16.97■□□□□ 0.31
PNKP-225ENST00000636214 ENO2P09104 434 aaPredicted RBP16.97■□□□□ 0.31
PNKP-225ENST00000636214 SAT1P21673 171 aa16.97■□□□□ 0.31
PNKP-225ENST00000636214 BCL6P41182 706 aa16.97■□□□□ 0.31
PNKP-225ENST00000636214 XCR1P46094 333 aa16.97■□□□□ 0.31
PNKP-225ENST00000636214 TIAL1Q01085 375 aaKnown RBP eCLIP16.97■□□□□ 0.31
PNKP-225ENST00000636214 TMEM214Q6NUQ4 689 aaKnown RBP16.97■□□□□ 0.31
PNKP-225ENST00000636214 IGDCC3Q8IVU1 814 aa16.97■□□□□ 0.31
PNKP-225ENST00000636214 ARHGEF39Q8N4T4 335 aa16.97■□□□□ 0.31
PNKP-225ENST00000636214 BCORP1Q8N888 145 aa16.97■□□□□ 0.31
PNKP-225ENST00000636214 MFSD9Q8NBP5 474 aa16.97■□□□□ 0.31
PNKP-225ENST00000636214 SUN3Q8TAQ9 357 aa16.97■□□□□ 0.31
PNKP-225ENST00000636214 TRIM51Q9BSJ1 452 aa16.97■□□□□ 0.31
PNKP-225ENST00000636214 SGPP1Q9BX95 441 aa16.97■□□□□ 0.31
PNKP-225ENST00000636214 ZNF700Q9H0M5 742 aa16.97■□□□□ 0.31
PNKP-225ENST00000636214 DYRK1BQ9Y463 629 aa16.97■□□□□ 0.31
PNKP-225ENST00000636214 SCN2AQ99250 2005 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 LOC102723996A0A087X1L8 192 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 A0A1W2PQ72 361 aa16.96■□□□□ 0.31
PNKP-225ENST00000636214 EFCAB8A8MWE9 144 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms