RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 USP45Q70EL2 814 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 RTL10Q7L3V2 364 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 HIPK1Q86Z02 1210 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 BBS7Q8IWZ6 715 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 SP7Q8TDD2 431 aaPredicted RBP6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 NETO1Q8TDF5 533 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 SNX19Q92543 992 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 FAM120BQ96EK7 910 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 DACH2Q96NX9 599 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 PSD2Q9BQI7 771 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 IL1RAPQ9NPH3 570 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 PRDM6Q9NQX0 595 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 EXD2Q9NVH0 621 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 ARL15Q9NXU5 204 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 MBD1Q9UIS9 605 aaPredicted RBP6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 UTS2RQ9UKP6 389 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 CHD9Q3L8U1 2897 aa6.94□□□□□ -1.3
CTNNA1-244ENST00000627109 A0A1W2PPC1 479 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 A0A1W2PRU2 124 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 PAPLNO95428 1278 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 ZBTB11O95625 1053 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 HIST1H2AGP0C0S8 130 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 HIST1H2ADP20671 130 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 ELK4P28324 431 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 RPIAP49247 311 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 NFATC3Q12968 1075 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 ATP1A4Q13733 1029 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 VEZF1Q14119 521 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 HKDC1Q2TB90 917 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 ZNF829Q3KNS6 432 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 HENMT1Q5T8I9 393 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 TXNDC8Q6A555 127 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 FAHD1Q6P587 224 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 DCP2Q8IU60 420 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 ADHFE1Q8IWW8 467 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 ZZZ3Q8IYH5 903 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 SYNPOQ8N3V7 929 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 GOT1L1Q8NHS2 421 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 CSGALNACT1Q8TDX6 532 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 RAB2BQ8WUD1 216 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 HIST1H2AHQ96KK5 128 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 CSF3RQ99062 836 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 HIST1H2AJQ99878 128 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 H2AFJQ9BTM1 129 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 SLC7A5P2Q9GIP4 190 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 ELOVL6Q9H5J4 265 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 ASAH2Q9NR71 780 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 THG1LQ9NWX6 298 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 MARK1Q9P0L2 795 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 FBXO10Q9UK96 956 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 ERVK-11Q9UQG0 969 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 TDRKHQ9Y2W6 561 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 A0A1W2PPW3 197 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 BOLA2-SMG1P6H3BVE0 249 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 RECQL5O94762 991 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 CYP4B1P13584 511 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 CD22P20273 847 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 EFNA1P20827 205 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 CD6P30203 668 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 HLA-FP30511 346 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 CDKN2CP42773 168 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 LSM3P62310 102 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 DLX2Q07687 328 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 ELOAQ14241 798 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 MOGQ16653 247 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 LDLRAP1Q5SW96 308 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 MLIPQ5VWP3 458 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 ASTLQ6HA08 431 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 KLHL35Q6PF15 583 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 MBOAT1Q6ZNC8 495 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 PTOV1Q86YD1 416 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 ANKRD13BQ86YJ7 626 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 C8orf59Q8N0T1 100 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 TMEM132CQ8N3T6 1108 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 MAFAQ8NHW3 353 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.93□□□□□ -1.35e-6■■■■■ 35.8
CTNNA1-244ENST00000627109 FRS2Q8WU20 508 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 HLA-CQ95604 372 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 PYCR2Q96C36 320 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 RADILQ96JH8 1075 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 OR52E6Q96RD3 313 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 COPS8Q99627 209 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 ASPSCR1Q9BZE9 553 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 TGIF2Q9GZN2 237 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 DUSP21Q9H596 190 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 RMND5AQ9H871 391 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 PAK1IP1Q9NWT1 392 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 VNN3Q9NY84 501 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 LSM7Q9UK45 103 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 MTCH2Q9Y6C9 303 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 A8MVJ9 347 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 MAGEB3O15480 346 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 JRKO75564 520 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 PRKD3O94806 890 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 KCNK5O95279 499 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 OR56A5P0C7T3 313 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 ATP1B2P14415 290 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 PRPS1L1P21108 318 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 PRKACGP22612 351 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 MASP1P48740 699 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms