RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 CBLL1Q75N03 491 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 EIF3MQ7L2H7 374 aaKnown RBP8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 TMPRSS11BQ86T26 416 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 CFAP206Q8IYR0 622 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 SPARTQ8N0X7 666 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 CPA6Q8N4T0 437 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 CELF5Q8N6W0 485 aaKnown RBP8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 SP7Q8TDD2 431 aaPredicted RBP8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZNF480Q8WV37 535 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 NEIL2Q969S2 332 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 MAGED4Q96JG8 741 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 RAD9AQ99638 391 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZCCHC2Q9C0B9 1178 aaKnown RBP8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 BAG5Q9UL15 447 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 ABCG2Q9UNQ0 655 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 CORO2BQ9UQ03 480 aa8.03□□□□□ -1.12
SND1-IT1-201ENST00000623342 DMDP11532 3685 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 GNG14A0A1W2PPG7 69 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 BCKDKO14874 412 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 HOXC11O43248 304 aaPredicted RBP8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 SPINT1O43278 529 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 UGT2B11O75310 529 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 SH3BGRLO75368 114 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 ADH1CP00326 375 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 MATN1P21941 496 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 IDSP22304 550 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 TIA1P31483 386 aaKnown RBP eCLIP8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 DNAJA1P31689 397 aaKnown RBP8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 CCR3P51677 355 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 RPS6KA3P51812 740 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 TMBIM6P55061 237 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 RPS13P62277 151 aaKnown RBP8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 TBPL1P62380 186 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 LRRC74AQ0VAA2 488 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 HKDC1Q2TB90 917 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 TCEAL5Q5H9L2 206 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 C12orf40Q86WS4 652 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 NPAS3Q8IXF0 933 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 SYTL1Q8IYJ3 562 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 SYNPOQ8N3V7 929 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 PIK3C3Q8NEB9 887 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 GPR156Q8NFN8 814 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 VN1R2Q8NFZ6 395 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 SNX19Q92543 992 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 COQ8BQ96D53 544 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 LRRC3BQ96PB8 259 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 DPH2Q9BQC3 489 aaPredicted RBP8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 ASPSCR1Q9BZE9 553 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 NAA50Q9GZZ1 169 aaKnown RBP8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 ETAA1Q9NY74 926 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 GULP1Q9UBP9 304 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 FZD4Q9ULV1 537 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 SLC27A6Q9Y2P4 619 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 COQ6Q9Y2Z9 468 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 MRPS23Q9Y3D9 190 aaKnown RBP8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 DYRK1BQ9Y463 629 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 GMEB1Q9Y692 573 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 VPS13AQ96RL7 3174 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 A0A1W2PPW3 197 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 C1orf226A1L170 272 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 MYO1GB0I1T2 1018 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 hCG_2039718K7EN88 272 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 PCDH7O60245 1069 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 LILRB5O75023 590 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 FKBP9O95302 570 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 SOD1P00441 154 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 NPPBP16860 134 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 EFNA1P20827 205 aaPredicted RBP8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 FPR1P21462 350 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 AGXTP21549 392 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 ITGB7P26010 798 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 IRS1P35568 1242 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 STT3AP46977 705 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 EMP3P54852 163 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 ELP6Q0PNE2 266 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 C10orf62Q5T681 223 aaPredicted RBP8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 LAIR2Q6ISS4 152 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 GALNT18Q6P9A2 607 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 CEP68Q76N32 757 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 ZNF765Q7L2R6 523 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 VTCN1Q7Z7D3 282 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 GALNT10Q86SR1 603 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 CYP4Z1Q86W10 505 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 HORMAD1Q86X24 394 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 TRAPPC5Q8IUR0 188 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 SETD9Q8NE22 299 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 FBLIM1Q8WUP2 373 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 SGCDQ92629 289 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 CXorf40BQ96DE9 158 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 NUS1Q96E22 293 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 THAP11Q96EK4 314 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 WDR34Q96EX3 536 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 HSH2DQ96JZ2 352 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 EFCAB11Q9BUY7 163 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 LHPPQ9H008 270 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 OR2AG1Q9H205 316 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 CHST8Q9H2A9 424 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 TRIT1Q9H3H1 467 aaKnown RBP8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 VPS4AQ9UN37 437 aa8.02□□□□□ -1.13
SND1-IT1-201ENST00000623342 SNX5Q9Y5X3 404 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms