RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 RAB8AP61006 207 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 ENPP6Q6UWR7 440 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 RANBP10Q6VN20 620 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 PRR23BQ6ZRT6 265 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 PIK3R3Q92569 461 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 PCBD2Q9H0N5 130 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 CARS2Q9HA77 564 aaKnown RBP15.66■□□□□ 0.1
GABRB3-215ENST00000622697 UTS2RQ9UKP6 389 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 TFPIP10646 304 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 E2F2Q14209 437 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 BICRALQ6AI39 1079 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 TMEM126BQ8IUX1 230 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 ALPK1Q96QP1 1244 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 RACGAP1Q9H0H5 632 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 DNAJC27Q9NZQ0 273 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 KCNK6Q9Y257 313 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 PCDHGA7Q9Y5G6 932 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 NME4O00746 187 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 TLX2O43763 284 aaPredicted RBP15.66■□□□□ 0.1
GABRB3-215ENST00000622697 ILF3Q12906 894 aaKnown RBP eCLIP15.66■□□□□ 0.1
GABRB3-215ENST00000622697 LMAN2Q12907 356 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 SLC13A2Q13183 592 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 KIAA1614Q5VZ46 1190 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 PM20D1Q6GTS8 502 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 GRHL3Q8TE85 626 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 GAL3ST4Q96RP7 486 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 POLE4Q9NR33 117 aa15.66■□□□□ 0.1
GABRB3-215ENST00000622697 CAPN14A8MX76 684 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 ALPPL2P10696 532 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 ZNF311Q5JNZ3 666 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 TMIGD1Q6UXZ0 262 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 RPTNQ6XPR3 784 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 GRASPQ7Z6J2 395 aaPredicted RBP15.65■□□□□ 0.1
GABRB3-215ENST00000622697 C3orf58Q8NDZ4 430 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 RGMAQ96B86 450 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 FAM120CQ9NX05 1096 aaKnown RBP15.65■□□□□ 0.1
GABRB3-215ENST00000622697 COMMD9Q9P000 198 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 PTBP2Q9UKA9 531 aaKnown RBP15.65■□□□□ 0.1
GABRB3-215ENST00000622697 COL2A1P02458 1487 aaPredicted RBP15.65■□□□□ 0.1
GABRB3-215ENST00000622697 NWD2Q9ULI1 1742 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 SLC35F4A4IF30 521 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 ACTR1BP42025 376 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 OR2B6P58173 313 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 ACTR1AP61163 376 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 DPY19L3Q6ZPD9 716 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 RANBP9Q96S59 729 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 TM9SF3Q9HD45 589 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 FAM172BPA6NC97 362 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 STC2O76061 302 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 CAPN3P20807 821 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 MPIP34949 423 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 SIX5Q8N196 739 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 SCAIQ8N9R8 606 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 PMEPA1Q969W9 287 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 FAM210AQ96ND0 272 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 P2RX2Q9UBL9 471 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 A0A0J9YVX5 310 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 DAPL1A0PJW8 107 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 LEFTY1O75610 366 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 NPPAP01160 153 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 TMEM115Q12893 351 aaPredicted RBP15.65■□□□□ 0.1
GABRB3-215ENST00000622697 LIN54Q6MZP7 749 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 SLC45A3Q96JT2 553 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 ZNF514Q96K75 400 aaPredicted RBP15.65■□□□□ 0.1
GABRB3-215ENST00000622697 RIPOR3Q96MK2 946 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 HERC2P3Q9BVR0 1158 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 CALML5Q9NZT1 146 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 SPO11Q9Y5K1 396 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 DNAJC25-GNG10A0A024R161 153 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 PPP6CO00743 305 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 TSPAN6O43657 245 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 DDX6P26196 483 aaKnown RBP eCLIP15.65■□□□□ 0.1
GABRB3-215ENST00000622697 ACRV1P26436 265 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 CSTF1Q05048 431 aaKnown RBP15.65■□□□□ 0.1
GABRB3-215ENST00000622697 KLHL22Q53GT1 634 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 ENPP7Q6UWV6 458 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 TRNT1Q96Q11 434 aaKnown RBP15.65■□□□□ 0.1
GABRB3-215ENST00000622697 GINS4Q9BRT9 223 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 ERVK-18Q9QC07 812 aa15.65■□□□□ 0.1
GABRB3-215ENST00000622697 A0A075B6Q4 140 aa15.64■□□□□ 0.09
GABRB3-215ENST00000622697 ZNF840PA6NDX5 716 aa15.64■□□□□ 0.09
GABRB3-215ENST00000622697 SCD5Q86SK9 330 aa15.64■□□□□ 0.09
GABRB3-215ENST00000622697 TSEN15Q8WW01 171 aaKnown RBP15.64■□□□□ 0.09
GABRB3-215ENST00000622697 SLC5A11Q8WWX8 675 aa15.64■□□□□ 0.09
GABRB3-215ENST00000622697 FUBP1Q96AE4 644 aaKnown RBP15.64■□□□□ 0.09
GABRB3-215ENST00000622697 TMED9Q9BVK6 235 aa15.64■□□□□ 0.09
GABRB3-215ENST00000622697 SLC28A3Q9HAS3 691 aa15.64■□□□□ 0.09
GABRB3-215ENST00000622697 CHD4Q14839 1912 aa15.64■□□□□ 0.09
GABRB3-215ENST00000622697 EEDO75530 441 aaKnown RBP15.64■□□□□ 0.09
GABRB3-215ENST00000622697 ATAT1Q5SQI0 421 aa15.64■□□□□ 0.09
GABRB3-215ENST00000622697 SLC8B1Q6J4K2 584 aa15.64■□□□□ 0.09
GABRB3-215ENST00000622697 C7orf61Q8IZ16 206 aa15.64■□□□□ 0.09
GABRB3-215ENST00000622697 APCDD1Q8J025 514 aa15.64■□□□□ 0.09
GABRB3-215ENST00000622697 MINDY1Q8N5J2 469 aa15.64■□□□□ 0.09
GABRB3-215ENST00000622697 OR6K6Q8NGW6 343 aa15.64■□□□□ 0.09
GABRB3-215ENST00000622697 MED28Q9H204 178 aa15.64■□□□□ 0.09
GABRB3-215ENST00000622697 ANKRA2Q9H9E1 313 aa15.64■□□□□ 0.09
GABRB3-215ENST00000622697 NDRG2Q9UN36 371 aaKnown RBP15.64■□□□□ 0.09
GABRB3-215ENST00000622697 ALS2Q96Q42 1657 aa15.64■□□□□ 0.09
GABRB3-215ENST00000622697 ZBTB42B2RXF5 422 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms