RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ZNF765Q7L2R6 523 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 TMEM150AQ86TG1 271 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 GALNT15Q8N3T1 639 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 LMNTD1Q8N9Z9 388 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 ZHX1-C8orf76Q96EF9 292 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 ZNF607Q96SK3 696 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 PKMYT1Q99640 499 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 Q9N2J8 555 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 SLCO1B3Q9NPD5 702 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 KCND3Q9UK17 655 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 RNF11Q9Y3C5 154 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 DNMT3AQ9Y6K1 912 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-229ENST00000622668 SCN1AP35498 2009 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 CACNA1IQ9P0X4 2223 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 SCN10AQ9Y5Y9 1956 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 NUP205Q92621 2012 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 TP53I11O14683 189 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 PIP5K1BO14986 540 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 PEX1O43933 1283 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 IGLV3-27P01718 113 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 IL7RP16871 459 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 LHCGRP22888 699 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 ATP5A1P25705 553 aaKnown RBP8.77□□□□□ -1.01
HDAC9-229ENST00000622668 TMED10P49755 219 aaKnown RBP8.77□□□□□ -1.01
HDAC9-229ENST00000622668 METAP1P53582 386 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 SHC2P98077 582 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 PTSQ03393 145 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 RFTN2Q52LD8 501 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-229ENST00000622668 TMEM184AQ6ZMB5 413 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 OR4N5Q8IXE1 308 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 CADM4Q8NFZ8 388 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 OR4F6Q8NGB9 312 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 CCL4L1Q8NHW4 92 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 FAM110BQ8TC76 370 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 ZNF473Q8WTR7 871 aaKnown RBP8.77□□□□□ -1.01
HDAC9-229ENST00000622668 EZH1Q92800 747 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-229ENST00000622668 EME1Q96AY2 570 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 PTCD3Q96EY7 689 aaKnown RBP8.77□□□□□ -1.01
HDAC9-229ENST00000622668 PPM1MQ96MI6 270 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 SPATA7Q9P0W8 599 aa8.77□□□□□ -1.01
HDAC9-229ENST00000622668 ABCA7Q8IZY2 2146 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 ATAD5Q96QE3 1844 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 C15orf38-AP3S2A0A0A6YYH1 394 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 A0A1W2PRB8 838 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 OTOL1A6NHN0 477 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-229ENST00000622668 TTLL8A6PVC2 850 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 TNFRSF10CO14798 259 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 OLFM2O95897 454 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 NUDT17P0C025 328 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 MPC1LP0DKB6 136 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 ZNF23P17027 643 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 AGTR2P50052 363 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 CCL11P51671 97 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 LARS2Q15031 903 aaKnown RBP8.76□□□□□ -1.01
HDAC9-229ENST00000622668 TCEAL1Q15170 157 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 FAM69BQ5VUD6 431 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 GPR153Q6NV75 609 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 ARPINQ7Z6K5 226 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 IGDCC3Q8IVU1 814 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 DEFB107AQ8IZN7 70 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 FUBP1Q96AE4 644 aaKnown RBP8.76□□□□□ -1.01
HDAC9-229ENST00000622668 SEC16BQ96JE7 1060 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 LRRC3BQ96PB8 259 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 FBXO4Q9UKT5 387 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 DLGAP4Q9Y2H0 992 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 A8MT66 165 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 CSO75390 466 aaKnown RBP8.76□□□□□ -1.01
HDAC9-229ENST00000622668 SEC24DO94855 1032 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-229ENST00000622668 CKMT2P17540 419 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 GSSP48637 474 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 CLCN7P51798 805 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 MTTPP55157 894 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 RGS8P57771 180 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-229ENST00000622668 HERC3Q15034 1050 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 RPS27LQ71UM5 84 aaKnown RBP8.76□□□□□ -1.01
HDAC9-229ENST00000622668 TRPM8Q7Z2W7 1104 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 TICAM1Q8IUC6 712 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 OR8K5Q8NH50 307 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 VPS33AQ96AX1 596 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 TRPV4Q9HBA0 871 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 ZBTB20Q9HC78 741 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-229ENST00000622668 MS4A12Q9NXJ0 267 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 DHCR7Q9UBM7 475 aaKnown RBP8.76□□□□□ -1.01
HDAC9-229ENST00000622668 ICE1Q9Y2F5 2266 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 ZMPSTE24O75844 475 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 PRPS2P11908 318 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 FOXN2P32314 431 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 LEPRP48357 1165 aaKnown RBP8.76□□□□□ -1.01
HDAC9-229ENST00000622668 HERVK_113P63132 956 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 PLK5Q496M5 336 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 CYP27C1Q4G0S4 372 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 CYP2R1Q6VVX0 501 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 DEF8Q6ZN54 512 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 P3H2Q8IVL5 708 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 KIF2BQ8N4N8 673 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 ZNF548Q8NEK5 533 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-229ENST00000622668 OR4K14Q8NGD5 310 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 VANGL1Q8TAA9 524 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-229ENST00000622668 MSLNLQ96KJ4 702 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 RANBP9Q96S59 729 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms