RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 ANKMY1Q9P2S6 941 aa17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 EPHA6Q9UF33 1036 aa17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 COL5A1P20908 1838 aaPredicted RBP17.09■□□□□ 0.33
PTCHD3-202ENST00000622555 WDR87Q6ZQQ6 2873 aa17.08■□□□□ 0.33
PTCHD3-202ENST00000622555 OR2A25A4D2G3 310 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 RGS14O43566 566 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 VPS4BO75351 444 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 LDOC1O95751 146 aaPredicted RBP17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 CD59P13987 128 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 CD1CP29017 333 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 PHEXP78562 749 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 ZNF33BQ06732 778 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 LSM12Q3MHD2 195 aaKnown RBP17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 C10orf62Q5T681 223 aaPredicted RBP17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 FCRL6Q6DN72 434 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 USP53Q70EK8 1073 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 TRIM46Q7Z4K8 759 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 IFI44Q8TCB0 444 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 ACTRT2Q8TDY3 377 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 STON2Q8WXE9 905 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 ZUFSPQ96AP4 578 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 MAP3K3Q99759 626 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 CCDC3Q9BQI4 270 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 ACPTQ9BZG2 426 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 FTSJ1Q9UET6 329 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 SLC12A4Q9UP95 1085 aa17.08■□□□□ 0.32
PTCHD3-202ENST00000622555 ANKDD1BA6NHY2 528 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 E9PBE3 544 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 LCMT2O60294 686 aaKnown RBP17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 KLHL41O60662 606 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 HOXB3P14651 431 aaPredicted RBP17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 ST6GAL1P15907 406 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 CSF2RBP32927 897 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 BCL6P41182 706 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 SCTRP47872 440 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 CYP4F2P78329 520 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 HMGCS1Q01581 520 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 CYP4F3Q08477 520 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 CSTF3Q12996 717 aaKnown RBP17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 NR6A1Q15406 480 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 Q6ZSR9 355 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 ALYREFQ86V81 257 aaKnown RBP17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 PLXDC1Q8IUK5 500 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 ANKRD53Q8N9V6 530 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 CEP70Q8NHQ1 597 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 BAHD1Q8TBE0 780 aaPredicted RBP17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 CCDC28BQ9BUN5 200 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 AKTIPQ9H8T0 292 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 C1GALT1Q9NS00 363 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 HEY2Q9UBP5 337 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 GIMAP2Q9UG22 337 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 KLHL3Q9UH77 587 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 TSC22D4Q9Y3Q8 395 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 KLK4Q9Y5K2 254 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 EP300Q09472 2414 aaPredicted RBP17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 TLCD2A6NGC4 264 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 MAGEB17A8MXT2 336 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 KIF1CO43896 1103 aaKnown RBP17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 PEX11AO75192 247 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 RPLP0P05388 317 aaKnown RBP17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 EZRP15311 586 aaKnown RBP17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 PIK3CBP42338 1070 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 CFHR1Q03591 330 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 TUBB3Q13509 450 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 GBP7Q8N8V2 638 aaPredicted RBP17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 TRAPPC9Q96Q05 1148 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 CD180Q99467 661 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 RHBGQ9H310 441 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 BRF2Q9HAW0 419 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 DMRT3Q9NQL9 472 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 ADGRE2Q9UHX3 823 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 CCL27Q9Y4X3 112 aa17.07■□□□□ 0.32
PTCHD3-202ENST00000622555 SERTM1A2A2V5 107 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 SLC9B1P1A6NJY1 282 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 C4orf47A7E2U8 309 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 FOXE1O00358 373 aaPredicted RBP17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 CASC3O15234 703 aaKnown RBP17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 SH3BP5O60239 455 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 PRAMEF10O60809 474 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 SH3BGRLO75368 114 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 RASSF9O75901 435 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 HSD3B1P14060 373 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 CKMT2P17540 419 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 TGM1P22735 817 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 HSD3B2P26439 372 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 SERPINB1P30740 379 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 RPS15AP62244 130 aaKnown RBP17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 RPS13P62277 151 aaKnown RBP17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 CCL7P80098 99 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 ZIC1Q15915 447 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 ATP6AP1LQ52LC2 224 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 SPDYAQ5MJ70 313 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 WDR74Q6RFH5 385 aaPredicted RBP17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 LARP4Q71RC2 724 aaKnown RBP eCLIP17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 VN1R5Q7Z5H4 357 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 NAXDQ8IW45 347 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 C19orf47Q8N9M1 422 aaKnown RBP17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 MFSD9Q8NBP5 474 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 TTLQ8NG68 377 aa17.06■□□□□ 0.32
PTCHD3-202ENST00000622555 SARGQ9BW04 601 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms