RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 KRTAP4-5Q9BYR2 181 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 FAM49AQ9H0Q0 323 aaPredicted RBP4.41□□□□□ -1.7
CPNE3-213ENST00000622183 MMP28Q9H239 520 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 ZNF334Q9HCZ1 680 aaPredicted RBP4.41□□□□□ -1.7
CPNE3-213ENST00000622183 INTS9Q9NV88 658 aaKnown RBP4.41□□□□□ -1.7
CPNE3-213ENST00000622183 CYP39A1Q9NYL5 469 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 ZNF624Q9P2J8 865 aaPredicted RBP4.41□□□□□ -1.7
CPNE3-213ENST00000622183 APPL1Q9UKG1 709 aa4.41□□□□□ -1.7
CPNE3-213ENST00000622183 GPRASP1Q5JY77 1395 aa4.4□□□□□ -1.7
CPNE3-213ENST00000622183 CACNB4O00305 520 aaPredicted RBP4.4□□□□□ -1.71
CPNE3-213ENST00000622183 CLPTM1O96005 669 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 NGFP01138 241 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 ATP1B1P05026 303 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 SBK2P0C263 348 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 P4HA1P13674 534 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 RPL36AP83881 106 aaKnown RBP4.4□□□□□ -1.71
CPNE3-213ENST00000622183 MYL7Q01449 175 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 RBM39Q14498 530 aaKnown RBP4.4□□□□□ -1.71
CPNE3-213ENST00000622183 IFI44LQ53G44 452 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 AGAP6Q5VW22 663 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 KIAA1161Q6NSJ0 714 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 SLC26A9Q7LBE3 791 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 RTL3Q8N8U3 475 aaKnown RBP4.4□□□□□ -1.71
CPNE3-213ENST00000622183 SLC37A3Q8NCC5 494 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 OR7A2PQ8NGA2 310 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 OR4C3Q8NH37 302 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 ST7LQ8TDW4 575 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 PRMT1Q99873 361 aaKnown RBP4.4□□□□□ -1.71
CPNE3-213ENST00000622183 IDI2Q9BXS1 227 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 SLC39A8Q9C0K1 460 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 THAP2Q9H0W7 228 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 CUEDC2Q9H467 287 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 THAP9Q9H5L6 903 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 IL36AQ9UHA7 158 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 SLC12A6Q9UHW9 1150 aa4.4□□□□□ -1.71
CPNE3-213ENST00000622183 ANTXRLA6NF34 631 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 ANKDD1BA6NHY2 528 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 SMIM1B2RUZ4 78 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 FPGTO14772 594 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 KLF11O14901 512 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 EPHB6O15197 1021 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 VEGFDO43915 354 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 ACSL4O60488 711 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 NADKO95544 446 aaPredicted RBP4.39□□□□□ -1.71
CPNE3-213ENST00000622183 PRSS1P07477 247 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 ERVK-10P10266 1014 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 MAGEA11P43364 429 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 OR3A3P47888 321 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 DNA2P51530 1060 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 UCP2P55851 309 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 CLDN17P56750 224 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 YBEYP58557 167 aaPredicted RBP4.39□□□□□ -1.71
CPNE3-213ENST00000622183 RPP38P78345 283 aaKnown RBP4.39□□□□□ -1.71
CPNE3-213ENST00000622183 STXBP2Q15833 593 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 EXT1Q16394 746 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 KIAA1644Q3SXP7 199 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 CCDC92Q53HC0 331 aaPredicted RBP4.39□□□□□ -1.71
CPNE3-213ENST00000622183 FAM76BQ5HYJ3 339 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 PEX5LQ8IYB4 626 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 C9orf106Q8NAJ2 232 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 RNASE8Q8TDE3 154 aaKnown RBP4.39□□□□□ -1.71
CPNE3-213ENST00000622183 LRRC8CQ8TDW0 803 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 SAP25Q8TEE9 199 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 DYRK2Q92630 601 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 ZNF524Q96C55 264 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 EEF2KMTQ96G04 330 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 EPSTI1Q96J88 318 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 GAL3ST4Q96RP7 486 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 PITPNM3Q9BZ71 974 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 ACPTQ9BZG2 426 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 TRIM7Q9C029 511 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 P2RY12Q9H244 342 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 PPANQ9NQ55 473 aaKnown RBP4.39□□□□□ -1.71
CPNE3-213ENST00000622183 OR6C2Q9NZP2 312 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 AKAP7Q9P0M2 348 aaPredicted RBP4.39□□□□□ -1.71
CPNE3-213ENST00000622183 MAD2L2Q9UI95 211 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 MOSPD1Q9UJG1 213 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 KCNJ14Q9UNX9 436 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 TNFRSF18Q9Y5U5 241 aa4.39□□□□□ -1.71
CPNE3-213ENST00000622183 TRIP12Q14669 1992 aaPredicted RBP4.38□□□□□ -1.71
CPNE3-213ENST00000622183 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 A0A0G2JLW4 131 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 C5orf51A6NDU8 294 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 E5RGE8 158 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 H3BMM5 538 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 RAF1P04049 648 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 NT5C2P49902 561 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 SLC34A1Q06495 639 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 ABRQ12979 859 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 TRIM29Q14134 588 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 PPA1Q15181 289 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 CCDC6Q16204 474 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 PKN2Q16513 984 aaKnown RBP4.38□□□□□ -1.71
CPNE3-213ENST00000622183 ACKR1Q16570 336 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 ZNF542PQ5EBM4 170 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 ARMCX4Q5H9R4 360 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 TMEM207Q6UWW9 146 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 CEACAM20Q6UY09 585 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 SIGLEC15Q6ZMC9 328 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 ZSCAN30Q86W11 494 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms