RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 HDDC2Q7Z4H3 204 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 CADM2Q8N3J6 435 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 MINDY2Q8NBR6 621 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 OR8J3Q8NGG0 315 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 WDR36Q8NI36 951 aaKnown RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 SLC38A4Q969I6 547 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 COQ7Q99807 217 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 CDADC1Q9BWV3 514 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 BTBD2Q9BX70 525 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 STMN3Q9NZ72 180 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 KLHL20Q9Y2M5 609 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 WBP11Q9Y2W2 641 aaKnown RBP6.75□□□□□ -1.33
NEDD9-216ENST00000620854 PCDHGB6Q9Y5F9 930 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 LYVE1Q9Y5Y7 322 aa6.75□□□□□ -1.33
NEDD9-216ENST00000620854 AREL1O15033 823 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 ANKRD28O15084 1053 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 PRAMEF12O95522 483 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 BCKDHAP12694 445 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 LPOP22079 712 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-216ENST00000620854 TALDO1P37837 337 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 RAB14P61106 215 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 NPRL3Q12980 569 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 CCDC58Q4VC31 144 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 CTSL3PQ5NE16 218 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 ATAD3CQ5T2N8 411 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 MANEALQ5VSG8 457 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 LIMS2Q7Z4I7 341 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 FGD2Q7Z6J4 655 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 TRAPPC5Q8IUR0 188 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 GALNT12Q8IXK2 581 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 CYP4Z2PQ8N1L4 340 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 TXNDC15Q96J42 360 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 RDH12Q96NR8 316 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 TRNT1Q96Q11 434 aaKnown RBP6.74□□□□□ -1.33
NEDD9-216ENST00000620854 FYTTD1Q96QD9 318 aaKnown RBP6.74□□□□□ -1.33
NEDD9-216ENST00000620854 SPRTNQ9H040 489 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-216ENST00000620854 THG1LQ9NWX6 298 aaKnown RBP6.74□□□□□ -1.33
NEDD9-216ENST00000620854 THUMPD1Q9NXG2 353 aaKnown RBP6.74□□□□□ -1.33
NEDD9-216ENST00000620854 SLC6A14Q9UN76 642 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 PIKFYVEQ9Y2I7 2098 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 DSCR3O14972 297 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 KMOO15229 486 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 SLC16A6O15403 523 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 NDST3O95803 873 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 OTCP00480 354 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 ALPIP09923 528 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 NUDT7P0C024 238 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 OR56A5P0C7T3 313 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 RHOQP17081 205 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 SYN1P17600 705 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 EPORP19235 508 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 DGKAP23743 735 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 SLC19A1P41440 591 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 TTPAP49638 278 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 GRIK2Q13002 908 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 ZSWIM7Q19AV6 140 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 GALNT13Q8IUC8 556 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 UMODL1-AS1Q8N2C9 162 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 TBC1D19Q8N5T2 526 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 PPP3R2Q96LZ3 170 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF382Q96SR6 550 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 CNPPD1Q9BV87 410 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 MMP27Q9H306 513 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 RWDD3Q9Y3V2 267 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 NEUROG3Q9Y4Z2 214 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 DOCK3Q8IZD9 2030 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 M0R082 166 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 MEN1O00255 615 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 ARNTLO00327 626 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 IFRD1O00458 451 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-216ENST00000620854 KPNA5O15131 536 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 TMCC2O75069 709 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 PTHP01270 115 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 ITPKAP23677 461 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 CXCR2P25025 360 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 SLC15A1P46059 708 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 ABRQ12979 859 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 NDUFA5Q16718 116 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 RFX4Q33E94 735 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 TBRG1Q3YBR2 411 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 KIAA1614Q5VZ46 1190 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 NEK5Q6P3R8 708 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 LYPD8Q6UX82 237 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF551Q7Z340 670 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-216ENST00000620854 ENTHD1Q8IYW4 607 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 CAMKK1Q8N5S9 505 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 ASCC1Q8N9N2 400 aaKnown RBP6.74□□□□□ -1.33
NEDD9-216ENST00000620854 GTPBP3Q969Y2 492 aaKnown RBP6.74□□□□□ -1.33
NEDD9-216ENST00000620854 C2orf49Q9BVC5 232 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-216ENST00000620854 OSGIN1Q9UJX0 560 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 INSL6Q9Y581 213 aa6.74□□□□□ -1.33
NEDD9-216ENST00000620854 UNC80Q8N2C7 3258 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 OR2A25A4D2G3 310 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 GFRA2O00451 464 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 PITPNM1O00562 1244 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 STX16O14662 325 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 SLC9A3R1O14745 358 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 HOXC11O43248 304 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 SLC25A14O95258 325 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 NPPAP01160 153 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms