RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 FOXJ2Q9P0K8 574 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 PCDHGA4Q9Y5G9 962 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 ACACBO00763 2458 aa13.04□□□□□ -0.32
NEK3-210ENST00000620675 TEX51A0A1B0GUA7 166 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 TRABD2BA6NFA1 517 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 FFAR3O14843 346 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 GPR42O15529 346 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 ATP8B1O43520 1251 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 SH3BGRLO75368 114 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 ADRB1P08588 477 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 ATXN8OSP0DMR3 200 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 EZRP15311 586 aaKnown RBP13.03□□□□□ -0.32
NEK3-210ENST00000620675 CHN1P15882 459 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 CASP2P42575 452 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 ATP1A2P50993 1020 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 RBBP5Q15291 538 aaKnown RBP13.03□□□□□ -0.32
NEK3-210ENST00000620675 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.03□□□□□ -0.32
NEK3-210ENST00000620675 SLC38A9Q8NBW4 561 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 USP7Q93009 1102 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 ATP6V1E2Q96A05 226 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 PTCD3Q96EY7 689 aaKnown RBP13.03□□□□□ -0.32
NEK3-210ENST00000620675 CHRNA10Q9GZZ6 450 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 MID2Q9UJV3 735 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 MRPS2Q9Y399 296 aaKnown RBP13.03□□□□□ -0.32
NEK3-210ENST00000620675 URB1O60287 2271 aaKnown RBP13.03□□□□□ -0.32
NEK3-210ENST00000620675 CROCCQ5TZA2 2017 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 MGAQ8IWI9 3026 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 TRBC2A0A5B9 178 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 TMX2-CTNND1H3BSU7 103 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 TNFSF15O95150 251 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 NR1D1P20393 614 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 SCTRP47872 440 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 NEK2P51955 445 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 SLC18A1P54219 525 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 PCDH1Q08174 1060 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 CFAP157Q5JU67 520 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 WASHC2DQ5SRD0 308 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 METTL2BQ6P1Q9 378 aaKnown RBP13.03□□□□□ -0.32
NEK3-210ENST00000620675 ZNF655Q8N720 491 aaPredicted RBP13.03□□□□□ -0.32
NEK3-210ENST00000620675 L3MBTL4Q8NA19 623 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 AGAP11Q8TF27 550 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 HBEGFQ99075 208 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 AIF1LQ9BQI0 150 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 NTMT1Q9BV86 223 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 EHD1Q9H4M9 534 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 MID1IP1Q9NPA3 183 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 FARSBQ9NSD9 589 aaKnown RBP13.03□□□□□ -0.32
NEK3-210ENST00000620675 NKIRAS1Q9NYS0 192 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 ANKMY1Q9P2S6 941 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 PLCL2Q9UPR0 1127 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 TIMM22Q9Y584 194 aa13.03□□□□□ -0.32
NEK3-210ENST00000620675 TMEM233B4DJY2 109 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 B4E171 279 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 C4orf51C9J302 202 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 POLR1CO15160 346 aaPredicted RBP13.02□□□□□ -0.33
NEK3-210ENST00000620675 B3GALT4O96024 378 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 TSPAN7P41732 249 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 LCP2Q13094 533 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 TBCCQ15814 346 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 ARL13AQ5H913 290 aaPredicted RBP13.02□□□□□ -0.33
NEK3-210ENST00000620675 TMTC4Q5T4D3 741 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 GRHL2Q6ISB3 625 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 TMIGD1Q6UXZ0 262 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 MILR1Q7Z6M3 343 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 CDYL2Q8N8U2 506 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 MFSD9Q8NBP5 474 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 KCT2Q8NC54 265 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 OR7G3Q8NG95 312 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 AGR3Q8TD06 166 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 MTFMTQ96DP5 389 aaKnown RBP13.02□□□□□ -0.33
NEK3-210ENST00000620675 ZNF285Q96NJ3 590 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 SARGQ9BW04 601 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 AKIRIN1Q9H9L7 192 aaPredicted RBP13.02□□□□□ -0.33
NEK3-210ENST00000620675 POLR1BQ9H9Y6 1135 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 FBXO8Q9NRD0 319 aa13.02□□□□□ -0.33
NEK3-210ENST00000620675 MAP1BP46821 2468 aaKnown RBP13.02□□□□□ -0.33
NEK3-210ENST00000620675 BIRC5O15392 142 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 OR2B3O76000 313 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 CLDN9O95484 217 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 NTRK1P04629 796 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 SERPIND1P05546 499 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 MSL3P1P0C860 447 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 HRH2P25021 359 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 SERPINB3P29508 390 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 HTR6P50406 440 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 RPS15AP62244 130 aaKnown RBP13.01□□□□□ -0.33
NEK3-210ENST00000620675 ACY1Q03154 408 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 HYAL2Q12891 473 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 DDX39BQ13838 428 aaKnown RBP13.01□□□□□ -0.33
NEK3-210ENST00000620675 ZRSR2Q15696 482 aaKnown RBP13.01□□□□□ -0.33
NEK3-210ENST00000620675 CLEC6AQ6EIG7 209 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 GPRIN3Q6ZVF9 776 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 CREB3L4Q8TEY5 395 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 SLC46A1Q96NT5 459 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 ZNF382Q96SR6 550 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 MTERF1Q99551 399 aaKnown RBP13.01□□□□□ -0.33
NEK3-210ENST00000620675 CAPS2Q9BXY5 557 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 KLHL31Q9H511 634 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 ASCL3Q9NQ33 180 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 RARRES3Q9UL19 164 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms