RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	B3GAT3	O94766	335 aa		11.21	□□□□□ -0.62
TP53-222	ENST00000617185	ALDH1A1	P00352	501 aa		11.21	□□□□□ -0.62
TP53-222	ENST00000617185	ASGR1	P07306	291 aa		11.21	□□□□□ -0.62
TP53-222	ENST00000617185	ACSM4	P0C7M7	580 aa		11.21	□□□□□ -0.62
TP53-222	ENST00000617185	ARSB	P15848	533 aa		11.21	□□□□□ -0.62
TP53-222	ENST00000617185	KCNQ1	P51787	676 aa		11.21	□□□□□ -0.62
TP53-222	ENST00000617185	RPA4	Q13156	261 aa		11.21	□□□□□ -0.62
TP53-222	ENST00000617185	VEPH1	Q14D04	833 aa		11.21	□□□□□ -0.62
TP53-222	ENST00000617185	TSC22D1	Q15714	1073 aa		11.21	□□□□□ -0.62
TP53-222	ENST00000617185	CERCAM	Q5T4B2	595 aa		11.21	□□□□□ -0.62
TP53-222	ENST00000617185	LCN1P1	Q5VSP4	162 aa		11.21	□□□□□ -0.62
TP53-222	ENST00000617185	OTUD1	Q5VV17	481 aa	Predicted RBP	11.21	□□□□□ -0.62
TP53-222	ENST00000617185	SHQ1	Q6PI26	577 aa	Known RBP	11.21	□□□□□ -0.62
TP53-222	ENST00000617185	ZNF567	Q8N184	647 aa		11.21	□□□□□ -0.62
TP53-222	ENST00000617185	STX19	Q8N4C7	294 aa		11.21	□□□□□ -0.62
TP53-222	ENST00000617185	DUSP18	Q8NEJ0	188 aa		11.21	□□□□□ -0.62
TP53-222	ENST00000617185	PCNP	Q8WW12	178 aa	Known RBP	11.21	□□□□□ -0.62
TP53-222	ENST00000617185	RHBDF1	Q96CC6	855 aa		11.21	□□□□□ -0.62
TP53-222	ENST00000617185	DPCD	Q9BVM2	203 aa	Predicted RBP	11.21	□□□□□ -0.62
TP53-222	ENST00000617185	PTGDR2	Q9Y5Y4	395 aa		11.21	□□□□□ -0.62
TP53-222	ENST00000617185	KCNMB2	Q9Y691	235 aa		11.21	□□□□□ -0.62
TP53-222	ENST00000617185	MANSC4	A6NHS7	340 aa	Predicted RBP	11.2	□□□□□ -0.62
TP53-222	ENST00000617185	DPYSL4	O14531	572 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	MUSK	O15146	869 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	ORC5	O43913	435 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	VPS4B	O75351	444 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	SLC22A3	O75751	556 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	TH	P07101	528 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	FGF4	P08620	206 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	SRC	P12931	536 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	KCNE1	P15382	129 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	POLR2J	P52435	117 aa	Known RBP	11.2	□□□□□ -0.62
TP53-222	ENST00000617185	DIO3	P55073	304 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	TIGD5	Q53EQ6	642 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	MZT2B	Q6NZ67	158 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	PID1	Q7Z2X4	250 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	TMPRSS9	Q7Z410	1059 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	SPATA19	Q7Z5L4	167 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	FAM124A	Q86V42	546 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	ATAD1	Q8NBU5	361 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	SLC37A3	Q8NCC5	494 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	TEX47	Q8TBZ9	253 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	BTN2A2	Q8WVV5	523 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	SLC9A6	Q92581	669 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	DNASE1L2	Q92874	299 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	TEX37	Q96LM6	180 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	DUSP16	Q9BY84	665 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	GSX2	Q9BZM3	304 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	SLC19A3	Q9BZV2	496 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	LYAR	Q9NX58	379 aa	Known RBP	11.2	□□□□□ -0.62
TP53-222	ENST00000617185	COA4	Q9NYJ1	87 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	PTTG3P	Q9NZH4	202 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	CMAHP	Q9Y471	501 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	ANKRD12	Q6UB98	2062 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185		A0A0A6YYJ9	748 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	GRXCR2	A6NFK2	248 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	TUBAL3	A6NHL2	446 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	LINC00587	B1AMM8	73 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	ABCD4	O14678	606 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	SLC43A1	O75387	559 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	SNAPIN	O95295	136 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	OR4Q2	P0C623	313 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	NMBR	P28336	390 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	ZFP36L2	P47974	494 aa	Known RBP	11.2	□□□□□ -0.62
TP53-222	ENST00000617185	MRPL19	P49406	292 aa	Known RBP	11.2	□□□□□ -0.62
TP53-222	ENST00000617185	MTPN	P58546	118 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	TAS2R39	P59534	338 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
TP53-222	ENST00000617185	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.2	□□□□□ -0.62
TP53-222	ENST00000617185	WSCD2	Q2TBF2	565 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	ZNF678	Q5SXM1	525 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	KIAA1614	Q5VZ46	1190 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	GPRIN3	Q6ZVF9	776 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	DET1	Q7L5Y6	550 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	RNF135	Q8IUD6	432 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	FAM9C	Q8IZT9	166 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	SRFBP1	Q8NEF9	429 aa	Known RBP	11.2	□□□□□ -0.62
TP53-222	ENST00000617185	OR5T2	Q8NGG2	359 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	UTP15	Q8TED0	518 aa	Known RBP	11.2	□□□□□ -0.62
TP53-222	ENST00000617185	RAD9A	Q99638	391 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	SMO	Q99835	787 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	KATNAL1	Q9BW62	490 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	GABARAPL1	Q9H0R8	117 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	RBFOX1	Q9NWB1	397 aa	Known RBP	11.2	□□□□□ -0.62
TP53-222	ENST00000617185	POLG2	Q9UHN1	485 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	PSORS1C1	Q9UIG5	152 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	PADI3	Q9ULW8	664 aa		11.2	□□□□□ -0.62
TP53-222	ENST00000617185	NUP205	Q92621	2012 aa		11.19	□□□□□ -0.62
TP53-222	ENST00000617185		A0A1W2PPL8	197 aa		11.19	□□□□□ -0.62
TP53-222	ENST00000617185	HNRNPCL2	B2RXH8	293 aa		11.19	□□□□□ -0.62
TP53-222	ENST00000617185	SYN3	O14994	580 aa		11.19	□□□□□ -0.62
TP53-222	ENST00000617185	PCDHGA12	O60330	932 aa		11.19	□□□□□ -0.62
TP53-222	ENST00000617185	HOXB6	P17509	224 aa	Known RBP	11.19	□□□□□ -0.62
TP53-222	ENST00000617185	GPC1	P35052	558 aa		11.19	□□□□□ -0.62
TP53-222	ENST00000617185	MATK	P42679	507 aa		11.19	□□□□□ -0.62
TP53-222	ENST00000617185	MEOX2	P50222	304 aa		11.19	□□□□□ -0.62
TP53-222	ENST00000617185	RORC	P51449	518 aa		11.19	□□□□□ -0.62
TP53-222	ENST00000617185	CLDN20	P56880	219 aa		11.19	□□□□□ -0.62
TP53-222	ENST00000617185	SH3BP2	P78314	561 aa		11.19	□□□□□ -0.62
TP53-222	ENST00000617185	ZNF91	Q05481	1191 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms