RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 ARG2P78540 354 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 CDC16Q13042 620 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 MRPL49Q13405 166 aaKnown RBP9.17□□□□□ -0.94
TARDBP-218ENST00000617172 HERC3Q15034 1050 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 RBM20Q5T481 1227 aaKnown RBP9.17□□□□□ -0.94
TARDBP-218ENST00000617172 HECTD2Q5U5R9 776 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 STEAP4Q687X5 459 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 TMEM214Q6NUQ4 689 aaKnown RBP9.17□□□□□ -0.94
TARDBP-218ENST00000617172 HIBCHQ6NVY1 386 aaPredicted RBP9.17□□□□□ -0.94
TARDBP-218ENST00000617172 TMEM205Q6UW68 189 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 VN1R4Q7Z5H5 301 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 STRA8Q7Z7C7 330 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 PLD3Q8IV08 490 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 IGDCC3Q8IVU1 814 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 KLHL7Q8IXQ5 586 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 GPATCH11Q8N954 259 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 BBOF1Q8ND07 529 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 ST6GALNAC3Q8NDV1 305 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 ABHD11Q8NFV4 315 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 OR9A4Q8NGU2 314 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 OR56A3Q8NH54 315 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 SLC13A3Q8WWT9 602 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 HAS2Q92819 552 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 C8orf44Q96CB5 159 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 FBXL8Q96CD0 374 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 CFAP36Q96G28 342 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 SNF8Q96H20 258 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 CAPZA3Q96KX2 299 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 CYTH2Q99418 400 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 NAPGQ99747 312 aaPredicted RBP9.17□□□□□ -0.94
TARDBP-218ENST00000617172 TUBB6Q9BUF5 446 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 SARGQ9BW04 601 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 ATG10Q9H0Y0 220 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 KCNF1Q9H3M0 494 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 ANKHQ9HCJ1 492 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 NSMCE4AQ9NXX6 385 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 C19orf25Q9UFG5 118 aaPredicted RBP9.17□□□□□ -0.94
TARDBP-218ENST00000617172 TEKT2Q9UIF3 430 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 SLC5A6Q9Y289 635 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 MRPS2Q9Y399 296 aaKnown RBP9.17□□□□□ -0.94
TARDBP-218ENST00000617172 PTPN13Q12923 2485 aa9.17□□□□□ -0.94
TARDBP-218ENST00000617172 SPENQ96T58 3664 aaKnown RBP9.17□□□□□ -0.94
TARDBP-218ENST00000617172 TNRC6AQ8NDV7 1962 aaKnown RBP9.17□□□□□ -0.94
TARDBP-218ENST00000617172 PRRC2CQ9Y520 2896 aaKnown RBP9.17□□□□□ -0.94
TARDBP-218ENST00000617172 DOPEY2Q9Y3R5 2298 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 FER1L5A0AVI2 2057 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 ANKRD12Q6UB98 2062 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 TRAV17A0A0B4J275 112 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 WIPF3A6NGB9 483 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 P2RX6O15547 441 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 BANF1O75531 89 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 KLHL18O94889 574 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 SEC31AO94979 1220 aaKnown RBP9.16□□□□□ -0.94
TARDBP-218ENST00000617172 TSPAN12O95859 305 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 UQCRHP07919 91 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 AGTR2P50052 363 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 ITGA8P53708 1063 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 MGAT5Q09328 741 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 CBLBQ13191 982 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 PWP1Q13610 501 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 CSHL1Q14406 222 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 PHKG1Q16816 387 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 C4orf17Q53FE4 359 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 FAM180AQ6UWF9 173 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 LINC00696Q6ZRV3 163 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 ASPGQ86U10 573 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 ZC3H7AQ8IWR0 971 aaKnown RBP9.16□□□□□ -0.94
TARDBP-218ENST00000617172 NKAPQ8N5F7 415 aaKnown RBP9.16□□□□□ -0.94
TARDBP-218ENST00000617172 MFSD9Q8NBP5 474 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 OR4K1Q8NGD4 311 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 OR51Q1Q8NH59 317 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 BRIX1Q8TDN6 353 aaKnown RBP9.16□□□□□ -0.94
TARDBP-218ENST00000617172 FAR1Q8WVX9 515 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 PSMF1Q92530 271 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 ALKBH8Q96BT7 664 aaKnown RBP9.16□□□□□ -0.94
TARDBP-218ENST00000617172 VPS39Q96JC1 886 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 CNDP1Q96KN2 507 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 RNF32Q9H0A6 362 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 SYNPO2LQ9H987 977 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 CLK4Q9HAZ1 481 aaKnown RBP9.16□□□□□ -0.94
TARDBP-218ENST00000617172 MOCS1Q9NZB8 636 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 ZFATQ9P243 1243 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 PTGFRNQ9P2B2 879 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 PLEKHB1Q9UF11 243 aaPredicted RBP9.16□□□□□ -0.94
TARDBP-218ENST00000617172 CHMP2BQ9UQN3 213 aa9.16□□□□□ -0.94
TARDBP-218ENST00000617172 SNRNP200O75643 2136 aaKnown RBP9.16□□□□□ -0.94
TARDBP-218ENST00000617172 TRBC2A0A5B9 178 aa9.15□□□□□ -0.94
TARDBP-218ENST00000617172 FEZF1A0PJY2 475 aa9.15□□□□□ -0.94
TARDBP-218ENST00000617172 URADA6NGE7 173 aa9.15□□□□□ -0.94
TARDBP-218ENST00000617172 CYSRT1A8MQ03 144 aa9.15□□□□□ -0.94
TARDBP-218ENST00000617172 EFCAB8A8MWE9 144 aa9.15□□□□□ -0.94
TARDBP-218ENST00000617172 E7ESA3 106 aa9.15□□□□□ -0.94
TARDBP-218ENST00000617172 FFAR3O14843 346 aa9.15□□□□□ -0.94
TARDBP-218ENST00000617172 GPR42O15529 346 aa9.15□□□□□ -0.94
TARDBP-218ENST00000617172 OR1F1O43749 312 aa9.15□□□□□ -0.94
TARDBP-218ENST00000617172 LCMT2O60294 686 aaKnown RBP9.15□□□□□ -0.94
TARDBP-218ENST00000617172 CDH1P12830 882 aa9.15□□□□□ -0.94
TARDBP-218ENST00000617172 EDN3P14138 238 aa9.15□□□□□ -0.94
TARDBP-218ENST00000617172 SOX11P35716 441 aa9.15□□□□□ -0.94
TARDBP-218ENST00000617172 XCR1P46094 333 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms