RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 DHFRP00374 187 aa13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 OTCP00480 354 aa13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 SDC2P34741 201 aa13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 KIR3DL1P43629 444 aa13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 GZMKP49863 264 aa13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PTPRRQ15256 657 aa13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ZNF484Q5JVG2 852 aa13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 CLVS2Q5SYC1 327 aa13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PM20D1Q6GTS8 502 aa13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 SHQ1Q6PI26 577 aaKnown RBP13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 TMIGD1Q6UXZ0 262 aa13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ZSWIM9Q86XI8 627 aa13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 TRMT61AQ96FX7 289 aaKnown RBP13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 TMED9Q9BVK6 235 aa13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 DEFB129Q9H1M3 183 aa13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 FAM105AQ9NUU6 356 aa13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ACOXLQ9NUZ1 547 aa13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 CLEC2DQ9UHP7 191 aa13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PCDHGC4Q9Y5F7 938 aa13.58□□□□□ -0.24
TNFRSF11A-205ENST00000616710 C2orf81A6NN90 581 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 SLC7A4O43246 635 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 HIST1H2AGP0C0S8 130 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 MTHFD2P13995 350 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 HIST1H2ADP20671 130 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 KIR2DL3P43628 341 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 DAOAP59103 153 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 DSG2Q14126 1118 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ATP13A5Q4VNC0 1218 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 NDUFAF5Q5TEU4 345 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 FAM171A1Q5VUB5 890 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 NPLOC4Q8TAT6 608 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ZFAND1Q8TCF1 268 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 USP7Q93009 1102 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 HIST1H2AHQ96KK5 128 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PSKH2Q96QS6 385 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 HIST1H2AJQ99878 128 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 H2AFJQ9BTM1 129 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 SLC6A13Q9NSD5 602 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 GPRC5BQ9NZH0 403 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 NME7Q9Y5B8 376 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 LEUTXA8MZ59 168 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 TSPAN1O60635 241 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 NCR1O76036 304 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PTNP21246 168 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 DRD5P21918 477 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 MC4RP32245 332 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 TGFBR2P37173 567 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 GDI2P50395 445 aaKnown RBP13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 CLCN7P51798 805 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 RPS14P62263 151 aaKnown RBP13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 DEFB132Q7Z7B7 95 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 SLC51BQ86UW2 128 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 FAM83AQ86UY5 434 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 VPS37AQ8NEZ2 397 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 FBXW5Q969U6 566 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PCED1BQ96HM7 432 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 MS4A7Q9GZW8 240 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 VPS9D1Q9Y2B5 631 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ACTL7AQ9Y615 435 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 FGF4P08620 206 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 CCNCP24863 283 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PUDPQ08623 228 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 HKDC1Q2TB90 917 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 C17orf107Q6ZR85 190 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PLCZ1Q86YW0 608 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 CCDC117Q8IWD4 279 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 SYT14Q8NB59 555 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PEX13Q92968 403 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 FUBP1Q96AE4 644 aaKnown RBP13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 TFB2MQ9H5Q4 396 aaKnown RBP13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 TLR8Q9NR97 1041 aaKnown RBP13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 FKBPLQ9UIM3 349 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 NUP50Q9UKX7 468 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ARAP2Q8WZ64 1704 aa13.57□□□□□ -0.24
TNFRSF11A-205ENST00000616710 KNL1Q8NG31 2342 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 FAM227AF5H4B4 570 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 M0QZ92 97 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 LRRTM2O43300 516 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 GPX5O75715 221 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 STAU1O95793 577 aaKnown RBP13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ITPKAP23677 461 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 RFX2P48378 723 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ATP12AP54707 1039 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 GBX1Q14549 363 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 FCN2Q15485 313 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 PARP15Q460N3 678 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 IDNKQ5T6J7 187 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 FAM180BQ6P0A1 224 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 C11orf88Q6PI97 169 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 USP45Q70EL2 814 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ZNF598Q86UK7 904 aaKnown RBP13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 RNF175Q8N4F7 328 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 NKAPQ8N5F7 415 aaKnown RBP13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 OR6K2Q8NGY2 324 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 KIAA1191Q96A73 305 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 C12orf66Q96MD2 445 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 NUDT15Q9NV35 164 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 ARL15Q9NXU5 204 aa13.56□□□□□ -0.24
TNFRSF11A-205ENST00000616710 MLXQ9UH92 298 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms