RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 PHF12Q96QT6 1004 aa14.3□□□□□ -0.12
SNPH-203ENST00000614659 RIOK2Q9BVS4 552 aaKnown RBP14.3□□□□□ -0.12
SNPH-203ENST00000614659 PMF1-BGLAPU3KQ54 211 aa14.3□□□□□ -0.12
SNPH-203ENST00000614659 RORCP51449 518 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 AP3S2P59780 193 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 RUNX3Q13761 415 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 TIGD6Q17RP2 521 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 LIPJQ5W064 366 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 RNF44Q7L0R7 432 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 C14orf80Q86SX3 495 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 JAZF1Q86VZ6 243 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 OR52J3Q8NH60 311 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 FCRL4Q96PJ5 515 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 CHCHD6Q9BRQ6 235 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 AIG1Q9NVV5 245 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 PCDHGB1Q9Y5G3 927 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 LAMB1P07942 1786 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 LOC730098B7Z3J9 87 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 NT5EP21589 574 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 HMGCS1Q01581 520 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.29□□□□□ -0.12
SNPH-203ENST00000614659 KANK2Q63ZY3 851 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 ERN2Q76MJ5 926 aaKnown RBP14.29□□□□□ -0.12
SNPH-203ENST00000614659 TCEAL8Q8IYN2 117 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 NXPE1Q8N323 547 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 LMX1AQ8TE12 382 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 DPYSL5Q9BPU6 564 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 BRINP2Q9C0B6 783 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 PAK6Q9NQU5 681 aaPredicted RBP14.29□□□□□ -0.12
SNPH-203ENST00000614659 CACNA1SQ13698 1873 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 AGRPO00253 132 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 HMGN1P05114 100 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 ETV4P43268 484 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 OMPP47874 163 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 HSPB3Q12988 150 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 IL18Q14116 193 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 ZBTB6Q15916 424 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 MOGQ16653 247 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 UNC50Q53HI1 259 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 MEIOBQ8N635 442 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 FAM46DQ8NEK8 389 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 RNASE11Q8TAA1 199 aaKnown RBP14.29□□□□□ -0.12
SNPH-203ENST00000614659 DIRAS2Q96HU8 199 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 FEM1AQ9BSK4 669 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 NDC1Q9BTX1 674 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 RPF2Q9H7B2 306 aaKnown RBP14.29□□□□□ -0.12
SNPH-203ENST00000614659 KCTD3Q9Y597 815 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 IQCF5A8MTL0 148 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 SOX4Q06945 474 aaPredicted RBP14.29□□□□□ -0.12
SNPH-203ENST00000614659 SLC14A2Q15849 920 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 PHF19Q5T6S3 580 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 Q6ZVU0 165 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.29□□□□□ -0.12
SNPH-203ENST00000614659 GPR65Q8IYL9 337 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 MAPK15Q8TD08 544 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 KCNS3Q9BQ31 491 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 MAGIXQ9H6Y5 334 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 TRPV5Q9NQA5 729 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 MCUBQ9NWR8 336 aa14.29□□□□□ -0.12
SNPH-203ENST00000614659 TMEM189-UBE2V1I3L0A0 370 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 PSIP1O75475 530 aaKnown RBP14.28□□□□□ -0.12
SNPH-203ENST00000614659 LDOC1O95751 146 aaPredicted RBP14.28□□□□□ -0.12
SNPH-203ENST00000614659 S100A6P06703 90 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 UGT1A6P19224 532 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 UGT1A1P22309 533 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 UGT1A4P22310 534 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 HOXA11P31270 313 aaPredicted RBP14.28□□□□□ -0.12
SNPH-203ENST00000614659 UGT1A3P35503 534 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 CST9Q5W186 159 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 LGI4Q8N135 537 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 HERPUD2Q9BSE4 406 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 MCIDASD6RGH6 385 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 COCHO43405 550 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 SERPINA3P01011 423 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 TMBIM6P55061 237 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 KLHL24Q6TFL4 600 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 ZFAND4Q86XD8 727 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 GTPBP3Q969Y2 492 aaKnown RBP14.28□□□□□ -0.12
SNPH-203ENST00000614659 MSANTD3Q96H12 275 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 GPR62Q9BZJ7 368 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 ZNF224Q9NZL3 707 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 SIPA1L3O60292 1781 aaPredicted RBP14.28□□□□□ -0.12
SNPH-203ENST00000614659 EIF3FO00303 357 aaPredicted RBP14.28□□□□□ -0.12
SNPH-203ENST00000614659 TOP3BO95985 862 aaKnown RBP14.28□□□□□ -0.12
SNPH-203ENST00000614659 ACP5P13686 325 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 HOXC12P31275 282 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 NRG3P56975 720 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 AMZ1Q400G9 498 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 OR4F3Q6IEY1 312 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 TUBA3EQ6PEY2 450 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 USP30Q70CQ3 517 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 MTERF1Q99551 399 aaKnown RBP14.28□□□□□ -0.12
SNPH-203ENST00000614659 HSFX1Q9UBD0 423 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 GRXCR2A6NFK2 248 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.28□□□□□ -0.12
SNPH-203ENST00000614659 CD36P16671 472 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 RPL6Q02878 288 aaKnown RBP14.28□□□□□ -0.12
SNPH-203ENST00000614659 C6orf136Q5SQH8 315 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 PAMR1Q6UXH9 720 aa14.28□□□□□ -0.12
SNPH-203ENST00000614659 GALNT7Q86SF2 657 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms