RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 TUBB8Q3ZCM7 444 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 HES3Q5TGS1 186 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 CYB5D1Q6P9G0 228 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 RNF44Q7L0R7 432 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 TMPRSS12Q86WS5 348 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 CRLF3Q8IUI8 442 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 PLD3Q8IV08 490 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 MCATQ8IVS2 390 aaKnown RBP14.08□□□□□ -0.16
CD48-203ENST00000613788 MFSD9Q8NBP5 474 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 TRPV3Q8NET8 790 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 OR7G3Q8NG95 312 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 RERGQ96A58 199 aaPredicted RBP14.08□□□□□ -0.16
CD48-203ENST00000613788 C7orf26Q96N11 449 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 SORT1Q99523 831 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 CMKLR1Q99788 373 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 SPNS1Q9H2V7 528 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 ELOVL6Q9H5J4 265 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 ZDHHC2Q9UIJ5 367 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 ZFP69BQ9UJL9 534 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 HAO1Q9UJM8 370 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 AP1M2Q9Y6Q5 423 aa14.08□□□□□ -0.16
CD48-203ENST00000613788 DCDC2BA2VCK2 349 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 TCP11X1B4DZS4 312 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 FFAR3O14843 346 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 GPR42O15529 346 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 NRP2O60462 931 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 ULK1O75385 1050 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 CSO75390 466 aaKnown RBP14.07□□□□□ -0.16
CD48-203ENST00000613788 PCNAP12004 261 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 PDX1P52945 283 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 GYS2P54840 703 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 PHEXP78562 749 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 ZNF33BQ06732 778 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 FRG2Q64ET8 278 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 ATG14Q6ZNE5 492 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 ZNF655Q8N720 491 aaPredicted RBP14.07□□□□□ -0.16
CD48-203ENST00000613788 ZNF781Q8N8C0 355 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 ADAMTS14Q8WXS8 1223 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 FAR2Q96K12 515 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 FRG2BQ96QU4 278 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 OR2A5Q96R48 311 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 RHBGQ9H310 441 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 FANCEQ9HB96 536 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 PFDN4Q9NQP4 134 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 DLL3Q9NYJ7 618 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 TIMM22Q9Y584 194 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 PCDHGA4Q9Y5G9 962 aa14.07□□□□□ -0.16
CD48-203ENST00000613788 TXNDC9O14530 226 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 FOLR1P15328 257 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 BCL6P41182 706 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 PIK3CBP42338 1070 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 FOXA1P55317 472 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 CYP4F3Q08477 520 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 KCNAB1Q14722 419 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 C16orf72Q14CZ0 275 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 TCTE1Q5JU00 501 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 KANK2Q63ZY3 851 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 CLEC6AQ6EIG7 209 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 BPHLQ86WA6 291 aaPredicted RBP14.06□□□□□ -0.16
CD48-203ENST00000613788 GALNT15Q8N3T1 639 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 ANKRD53Q8N9V6 530 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 CAMKVQ8NCB2 501 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 WDR20Q8TBZ3 569 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 AGR3Q8TD06 166 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 SLC13A3Q8WWT9 602 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 SELENOMQ8WWX9 145 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 LIN37Q96GY3 246 aaPredicted RBP14.06□□□□□ -0.16
CD48-203ENST00000613788 FCRL4Q96PJ5 515 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 KCNA7Q96RP8 456 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 NLNQ9BYT8 704 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 TNFRSF12AQ9NP84 129 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 SLCO1B3Q9NPD5 702 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 SERTAD3Q9UJW9 196 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 FIS1Q9Y3D6 152 aa14.06□□□□□ -0.16
CD48-203ENST00000613788 SLCO1B7G3V0H7 640 aa14.05□□□□□ -0.16
CD48-203ENST00000613788 H0YGG7 62 aa14.05□□□□□ -0.16
CD48-203ENST00000613788 FOXE1O00358 373 aaPredicted RBP14.05□□□□□ -0.16
CD48-203ENST00000613788 MANBAO00462 879 aa14.05□□□□□ -0.16
CD48-203ENST00000613788 CLEC3AO75596 197 aa14.05□□□□□ -0.16
CD48-203ENST00000613788 VIMP08670 466 aaKnown RBP14.05□□□□□ -0.16
CD48-203ENST00000613788 SERPINB3P29508 390 aa14.05□□□□□ -0.16
CD48-203ENST00000613788 GABRA4P48169 554 aa14.05□□□□□ -0.16
CD48-203ENST00000613788 HK2P52789 917 aa14.05□□□□□ -0.16
CD48-203ENST00000613788 ARF3P61204 181 aaPredicted RBP14.05□□□□□ -0.16
CD48-203ENST00000613788 EIF3IQ13347 325 aaKnown RBP14.05□□□□□ -0.16
CD48-203ENST00000613788 PWP1Q13610 501 aa14.05□□□□□ -0.16
CD48-203ENST00000613788 SGO1Q5FBB7 561 aa14.05□□□□□ -0.16
CD48-203ENST00000613788 MANEAQ5SRI9 462 aa14.05□□□□□ -0.16
CD48-203ENST00000613788 FRMPD2BQ6IN97 320 aa14.05□□□□□ -0.16
CD48-203ENST00000613788 FAM47EQ6ZV65 393 aa14.05□□□□□ -0.16
CD48-203ENST00000613788 ASPGQ86U10 573 aa14.05□□□□□ -0.16
CD48-203ENST00000613788 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.05□□□□□ -0.16
CD48-203ENST00000613788 HUS1BQ8NHY5 278 aa14.05□□□□□ -0.16
CD48-203ENST00000613788 PIWIL2Q8TC59 973 aaKnown RBP14.05□□□□□ -0.16
CD48-203ENST00000613788 CCT6BQ92526 530 aa14.05□□□□□ -0.16
CD48-203ENST00000613788 MTFMTQ96DP5 389 aaKnown RBP14.05□□□□□ -0.16
CD48-203ENST00000613788 CCT7Q99832 543 aa14.05□□□□□ -0.16
CD48-203ENST00000613788 FGF21Q9NSA1 209 aa14.05□□□□□ -0.16
CD48-203ENST00000613788 PNPOQ9NVS9 261 aa14.05□□□□□ -0.16
CD48-203ENST00000613788 PSD3Q9NYI0 1048 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms