RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 FZD4Q9ULV1 537 aa13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 MRPS23Q9Y3D9 190 aaKnown RBP13.58□□□□□ -0.24
PCDHGA3-202ENST00000612467 CATP04040 527 aaKnown RBP13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 IGFBP5P24593 272 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 DCKP27707 260 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 KDELR2P33947 212 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 MLLT10P55197 1068 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 SLBPQ14493 270 aaKnown RBP eCLIP13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 ZNF547Q8IVP9 402 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 OR13F1Q8NGS4 319 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 CERS4Q9HA82 394 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 PRDM8Q9NQV8 689 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 TM7SF3Q9NS93 570 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 PDP1Q9P0J1 537 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 TMED5Q9Y3A6 229 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 VCANP13611 3396 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 SCAMP2O15127 329 aaKnown RBP13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 TLL1O43897 1013 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 C1orf105O95561 183 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 ADH5P11766 374 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 MAP2K4P45985 399 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 CLK3P49761 638 aaKnown RBP13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 PLA2G16P53816 162 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 DCDC1P59894 354 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 BROXQ5VW32 411 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 GRHL2Q6ISB3 625 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 FAM83HQ6ZRV2 1179 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 ARMCX6Q7L4S7 300 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 KIAA0907Q7Z7F0 614 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 LEMD2Q8NC56 503 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 PLA2G15Q8NCC3 412 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 C11orf24Q96F05 449 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 CCDC138Q96M89 665 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 TRIM39Q9HCM9 518 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 IL23AQ9NPF7 189 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 RASSF1Q9NS23 344 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 TMEM184CQ9NVA4 438 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 WARS2Q9UGM6 360 aaKnown RBP13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 NINQ8N4C6 2090 aa13.57□□□□□ -0.24
PCDHGA3-202ENST00000612467 SLC1A7O00341 560 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 BCKDKO14874 412 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 CCNDBP1O95273 360 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 HPRP00739 348 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 ETFAP13804 333 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 NPPBP16860 134 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 IDSP22304 550 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 ALDH4A1P30038 563 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 OR1E2P47887 323 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 CPTPQ5TA50 214 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 TTC23Q5W5X9 447 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 OR2T5Q6IEZ7 315 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 SLCO4C1Q6ZQN7 724 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 LSRQ86X29 649 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 SVOPLQ8N434 492 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 ZNF784Q8NCA9 323 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 OR2T29Q8NH02 315 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 OSBPL6Q9BZF3 934 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 GPATCH2Q9NW75 528 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 INSL6Q9Y581 213 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 NUMA1Q14980 2115 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 CEP290O15078 2479 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 A0A0J9YVX5 310 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 GRXCR1A8MXD5 290 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 KPNA5O15131 536 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 ABCB7O75027 752 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 GCM2O75603 506 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 AP2A2O94973 939 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 CPNE6O95741 557 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 FGBP02675 491 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 ZNF8P17098 575 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 BMPR1AP36894 532 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 LSM3P62310 102 aaKnown RBP13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 DCTN2Q13561 401 aaKnown RBP13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 FNDC3BQ53EP0 1204 aaKnown RBP13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 ZNF691Q5VV52 312 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 KLHL35Q6PF15 583 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 OR56A3Q8NH54 315 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 FCRL1Q96LA6 429 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 TIMMDC1Q9NPL8 285 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 USE1Q9NZ43 259 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 ERVK-18Q9QC07 812 aa13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 RUVBL1Q9Y265 456 aaKnown RBP13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 SAMHD1Q9Y3Z3 626 aaKnown RBP13.56□□□□□ -0.24
PCDHGA3-202ENST00000612467 MGAT4DA6NG13 374 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 C6P13671 934 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 GPX2P18283 190 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 GPR1P46091 355 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 HBA1P69905 142 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 CSTF3Q12996 717 aaKnown RBP13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 TMED1Q13445 227 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 AQP6Q13520 282 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 MPEG1Q2M385 716 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 ERAP2Q6P179 960 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 ADGRD2Q7Z7M1 963 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 SERPINA11Q86U17 422 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 GALNT13Q8IUC8 556 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 OR4A15Q8NGL6 344 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 OR52J3Q8NH60 311 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 GLMNQ92990 594 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 ZNF707Q96C28 371 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms