RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 C14orf119Q9NWQ9 140 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 VPS29Q9UBQ0 182 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 OR51B4Q9Y5P0 310 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 SMIM30A4D0T7 59 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 GABRR3A8MPY1 467 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 TNFRSF11BO00300 401 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 NRG2O14511 850 aaPredicted RBP13.58□□□□□ -0.24
COL6A1-207ENST00000612273 INPPL1O15357 1258 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 PRPS2P11908 318 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 SELPP16109 830 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 FEN1P39748 380 aaKnown RBP13.58□□□□□ -0.24
COL6A1-207ENST00000612273 SLC19A1P41440 591 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 STARD3Q14849 445 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 LRIF1Q5T3J3 769 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 MACC1Q6ZN28 852 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 NPAS4Q8IUM7 802 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 DCAF4L2Q8NA75 395 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 OR2AP1Q8NGE2 309 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 ALG14Q96F25 216 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 TPK1Q9H3S4 243 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 ZDHHC3Q9NYG2 299 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 RNF6Q9Y252 685 aa13.58□□□□□ -0.24
COL6A1-207ENST00000612273 TMEM221A6NGB7 291 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 GFRA2O00451 464 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 RGS5O15539 181 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 TLL1O43897 1013 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 TGFB1P01137 390 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 NR4A2P43354 598 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 FAM26DQ5JW98 314 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 C6orf183Q5T699 404 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 PLEKHG7Q6ZR37 379 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 OTOP2Q7RTS6 562 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 SZRD1Q7Z422 152 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 TMPRSS11BQ86T26 416 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 CCDC103Q8IW40 242 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 IL4I1Q96RQ9 567 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 NIPSNAP1Q9BPW8 284 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 IMPAD1Q9NX62 359 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 ATP11BQ9Y2G3 1177 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.57□□□□□ -0.24
COL6A1-207ENST00000612273 A0A1W2PRU2 124 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 TTC34A8MYJ7 566 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 GSTT2P0CG29 244 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 GSTT2BP0CG30 244 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 ETV3P41162 512 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 PRIM2P49643 509 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 RPS26P62854 115 aaKnown RBP13.57□□□□□ -0.24
COL6A1-207ENST00000612273 ELAVL2Q12926 359 aaKnown RBP13.57□□□□□ -0.24
COL6A1-207ENST00000612273 PLEKHG6Q3KR16 790 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 CPTPQ5TA50 214 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 OR4A15Q8NGL6 344 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 CMTM7Q96FZ5 175 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 SLIRPQ9GZT3 109 aaKnown RBP13.57□□□□□ -0.24
COL6A1-207ENST00000612273 SIAEQ9HAT2 523 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 RPS6KA6Q9UK32 745 aa13.57□□□□□ -0.24
COL6A1-207ENST00000612273 M0QX08 132 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 SH3BP5O60239 455 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 IGHA2P01877 340 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 PRPS1L1P21108 318 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 AZGP1P25311 298 aaKnown RBP13.56□□□□□ -0.24
COL6A1-207ENST00000612273 CD40LGP29965 261 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 WNT3P56703 355 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 MMP21Q8N119 569 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 ADAMTS19Q8TE59 1207 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 CIDECQ96AQ7 238 aaPredicted RBP13.56□□□□□ -0.24
COL6A1-207ENST00000612273 YIPF6Q96EC8 236 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 NRTNQ99748 197 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 CENPOQ9BU64 300 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 OR51B5Q9H339 312 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 MAGIXQ9H6Y5 334 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 PALMDQ9NP74 551 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 TMPRSS11EQ9UL52 423 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 RAB23Q9ULC3 237 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 A8MV72 311 aaPredicted RBP13.56□□□□□ -0.24
COL6A1-207ENST00000612273 PSMD11O00231 422 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 SSX4O60224 188 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 SLC16A8O95907 504 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 SPNP16150 400 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 CD9P21926 228 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 RPS3P23396 243 aaKnown RBP eCLIP13.56□□□□□ -0.24
COL6A1-207ENST00000612273 DAB2P98082 770 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 SYTL3Q4VX76 610 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 SLC8B1Q6J4K2 584 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 TMEM150AQ86TG1 271 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 SVOPQ8N4V2 548 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 APH1BQ8WW43 257 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 ASB11Q8WXH4 323 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 SUV39H2Q9H5I1 410 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 NDRG4Q9ULP0 352 aaKnown RBP13.56□□□□□ -0.24
COL6A1-207ENST00000612273 PCDHGA6Q9Y5G7 932 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 SOX14O95416 240 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 PTHP01270 115 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 RPLP2P05387 115 aaKnown RBP13.56□□□□□ -0.24
COL6A1-207ENST00000612273 CYP2A7P20853 494 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 MAPK1P28482 360 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 PDHA2P29803 388 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 ACOX1Q15067 660 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 TMEM53Q6P2H8 277 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 USP45Q70EL2 814 aa13.56□□□□□ -0.24
COL6A1-207ENST00000612273 THOC6Q86W42 341 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms