RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 MKS1Q9NXB0 559 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 MID2Q9UJV3 735 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 PCDHGA4Q9Y5G9 962 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 ASPMQ8IZT6 3477 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 CEP295Q9C0D2 2601 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 KIF26BQ2KJY2 2108 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 AKAP13Q12802 2813 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 TEX51A0A1B0GUA7 166 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 A0A1B0GX78 115 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 A8MT66 165 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 LCMT2O60294 686 aaKnown RBP13.61□□□□□ -0.23
CTSA-219ENST00000607841 SBK3P0C264 359 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 SLC35G6P0C7Q6 338 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 MYZAPP0CAP1 466 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 PIM1P11309 404 aaPredicted RBP13.61□□□□□ -0.23
CTSA-219ENST00000607841 VARSP26640 1264 aaKnown RBP13.61□□□□□ -0.23
CTSA-219ENST00000607841 EEF1DP29692 281 aaKnown RBP13.61□□□□□ -0.23
CTSA-219ENST00000607841 BCL6P41182 706 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 STAT5AP42229 794 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 CASP2P42575 452 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 SCTRP47872 440 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 DCDP81605 110 aaKnown RBP13.61□□□□□ -0.23
CTSA-219ENST00000607841 NFKB2Q00653 900 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 PCDH1Q08174 1060 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 GPS2Q13227 327 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 CHIT1Q13231 466 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 PWP1Q13610 501 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 GTF2H2Q13888 395 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 SLBPQ14493 270 aaKnown RBP eCLIP13.61□□□□□ -0.23
CTSA-219ENST00000607841 GTF2H2CQ6P1K8 395 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 TMIGD1Q6UXZ0 262 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 TTLL10Q6ZVT0 673 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 CCDC63Q8NA47 563 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 TRPV3Q8NET8 790 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 RDH11Q8TC12 318 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 UBE2E3Q969T4 207 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 RNF31Q96EP0 1072 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 WDR34Q96EX3 536 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 APOPT1Q96IL0 206 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 SEC16BQ96JE7 1060 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 CCNL2Q96S94 520 aaPredicted RBP13.61□□□□□ -0.23
CTSA-219ENST00000607841 STMN4Q9H169 189 aaPredicted RBP13.61□□□□□ -0.23
CTSA-219ENST00000607841 CENPHQ9H3R5 247 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 GEMIN8Q9NWZ8 242 aaKnown RBP13.61□□□□□ -0.23
CTSA-219ENST00000607841 NDOR1Q9UHB4 597 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 ZFP69BQ9UJL9 534 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 KCND3Q9UK17 655 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 CDC14AQ9UNH5 594 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 ASB1Q9Y576 335 aa13.61□□□□□ -0.23
CTSA-219ENST00000607841 GOLGA6L10A6NI86 522 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 SRRM3A6NNA2 597 aaPredicted RBP13.6□□□□□ -0.23
CTSA-219ENST00000607841 C21orf140B9A014 251 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 E2F3O00716 465 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 ACACBO00763 2458 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 DSCR3O14972 297 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 SIX3O95343 332 aaPredicted RBP13.6□□□□□ -0.23
CTSA-219ENST00000607841 CD63P08962 238 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 MYL2P10916 166 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 TCN2P20062 427 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 DLSTP36957 453 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 GCGRP47871 477 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 RPS15P62841 145 aaKnown RBP13.6□□□□□ -0.23
CTSA-219ENST00000607841 RGS1Q08116 209 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 DOC2AQ14183 400 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 HKDC1Q2TB90 917 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 C1orf189Q5VU69 101 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 LIPJQ5W064 366 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 PRMT9Q6P2P2 845 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 ZNF517Q6ZMY9 492 aaPredicted RBP13.6□□□□□ -0.23
CTSA-219ENST00000607841 GOLGA7Q7Z5G4 137 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 VN1R4Q7Z5H5 301 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 BANPQ8N9N5 519 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 ZNF740Q8NDX6 193 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 PPP4R1Q8TF05 950 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 ATP6V1E2Q96A05 226 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 TM4SF19Q96DZ7 209 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 MVB12AQ96EY5 273 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 PGM2Q96G03 612 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 GBP5Q96PP8 586 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 C1QTNF3Q9BXJ4 246 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 GPR87Q9BY21 358 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 IPPKQ9H8X2 491 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 ACTR8Q9H981 624 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 GPN2Q9H9Y4 310 aaPredicted RBP13.6□□□□□ -0.23
CTSA-219ENST00000607841 COPG2Q9UBF2 871 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 DHCR7Q9UBM7 475 aaKnown RBP13.6□□□□□ -0.23
CTSA-219ENST00000607841 CROTQ9UKG9 612 aa13.6□□□□□ -0.23
CTSA-219ENST00000607841 RUVBL1Q9Y265 456 aaKnown RBP13.6□□□□□ -0.23
CTSA-219ENST00000607841 LOC101059948A0A1B0GTJ6 334 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 URADA6NGE7 173 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 ANKDD1BA6NHY2 528 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 C9J4A7 227 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 PRPF4O43172 522 aaKnown RBP eCLIP13.59□□□□□ -0.231e-6■□□□□ 8.8
CTSA-219ENST00000607841 NDUFS4O43181 175 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 DLX3O60479 287 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 PLIN3O60664 434 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 UGDHO60701 494 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 WFS1O76024 890 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 PROCP04070 461 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 SERPIND1P05546 499 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms