RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 CIR1Q86X95 450 aaPredicted RBP5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 DHFR2Q86XF0 187 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 ADGRG3Q86Y34 549 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 LIX1LQ8IVB5 337 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 FOXP4Q8IVH2 680 aaPredicted RBP5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 ZNF34Q8IZ26 560 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 GCNT2Q8N0V5 402 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 GPR137CQ8N3F9 429 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 CADM2Q8N3J6 435 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 POMGNT2Q8NAT1 580 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 SYT14Q8NB59 555 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 NUDT10Q8NFP7 164 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 BPIFCQ8NFQ6 507 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 OR1M1Q8NGA1 313 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 OR10A7Q8NGE5 316 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 OR52J3Q8NH60 311 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 SLC35G2Q8TBE7 412 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 CPT1CQ8TCG5 803 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 PPP1R14AQ96A00 147 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 FUBP1Q96AE4 644 aaKnown RBP5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 KIAA1143Q96AT1 154 aaPredicted RBP5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 C1orf159Q96HA4 380 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 MAGEB10Q96LZ2 347 aaPredicted RBP5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 CLUHP3Q96NS8 147 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 WFIKKN1Q96NZ8 548 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 ZNF347Q96SE7 839 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 TMEM209Q96SK2 561 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 PYM1Q9BRP8 204 aaKnown RBP5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 MED18Q9BUE0 208 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 SEMA4CQ9C0C4 833 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 RAB33BQ9H082 229 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 ZMYND12Q9H0C1 365 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 MEGF9Q9H1U4 602 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 CDIP1Q9H305 208 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 KAT8Q9H7Z6 458 aaKnown RBP5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 HMG20AQ9NP66 347 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 ZDHHC4Q9NPG8 344 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 NANSQ9NR45 359 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 TREX1Q9NSU2 369 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 ACOXLQ9NUZ1 547 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 DNAJC28Q9NX36 388 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 ACTR10Q9NZ32 417 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 PEF1Q9UBV8 284 aaKnown RBP5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 NDRG3Q9UGV2 375 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 MKLN1Q9UL63 735 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 FZD10Q9ULW2 581 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 GUCA1BQ9UMX6 200 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 STARD10Q9Y365 291 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 CCL27Q9Y4X3 112 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 POLR3HQ9Y535 204 aaPredicted RBP5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 PCDHGB6Q9Y5F9 930 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 PSAT1Q9Y617 370 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 ALG5Q9Y673 324 aa5.65□□□□□ -1.5
LSM1P2-201ENST00000604911 TMEM131LA2VDJ0 1609 aa5.65□□□□□ -1.51
LSM1P2-201ENST00000604911 PTPRTO14522 1441 aa5.65□□□□□ -1.51
LSM1P2-201ENST00000604911 CC2D2AQ9P2K1 1620 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 A0A0A6YYK5 440 aaPredicted RBP5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 C9orf170A2RU37 121 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 A6NIZ1 184 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 NEDD8-MDP1E9PL57 170 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 H7C2Y5 167 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 KCNK1O00180 336 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 ADAMTS3O15072 1205 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 NKRFO15226 690 aaKnown RBP eCLIP5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 SURF4O15260 269 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 STX7O15400 261 aaKnown RBP5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 SNAP91O60641 907 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 UGT1A9O60656 530 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 RNASEH1O60930 286 aaKnown RBP5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 PRDM1O75626 825 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 GJB3O75712 270 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 CNTN5O94779 1100 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 NTSR2O95665 410 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 SCGB1D1O95968 90 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 IGHEP01854 428 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 MMP3P08254 477 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 SNRPB2P08579 225 aaKnown RBP5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 CD48P09326 243 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 PSMC3P17980 439 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 ERCC2P18074 760 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 UGT1A6P19224 532 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 OGNP20774 298 aaKnown RBP5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 UGT1A1P22309 533 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 UGT1A4P22310 534 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 NR4A1P22736 598 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 MMP8P22894 467 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 TNFSF4P23510 183 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 PAX6P26367 422 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 IL1R2P27930 398 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 PIK3R1P27986 724 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 MPIP34949 423 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 UGT1A3P35503 534 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 UGT1A5P35504 534 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 LTBRP36941 435 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 TGFBR2P37173 567 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 ECI1P42126 302 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 PIK3CBP42338 1070 aa5.64□□□□□ -1.51
LSM1P2-201ENST00000604911 HLCSP50747 726 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms