RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 SLC29A3Q9BZD2 475 aa17.19■□□□□ 0.34
CCDC12-208ENST00000603885 FAM129AQ9BZQ8 928 aa17.19■□□□□ 0.34
CCDC12-208ENST00000603885 ZBTB20Q9HC78 741 aaPredicted RBP17.19■□□□□ 0.34
CCDC12-208ENST00000603885 ZNF160Q9HCG1 818 aa17.19■□□□□ 0.34
CCDC12-208ENST00000603885 NSMCE4AQ9NXX6 385 aa17.19■□□□□ 0.34
CCDC12-208ENST00000603885 MOCS1Q9NZB8 636 aa17.19■□□□□ 0.34
CCDC12-208ENST00000603885 MRPS2Q9Y399 296 aaKnown RBP17.19■□□□□ 0.34
CCDC12-208ENST00000603885 SHANK1Q9Y566 2161 aa17.19■□□□□ 0.34
CCDC12-208ENST00000603885 USP9XQ93008 2570 aaPredicted RBP17.18■□□□□ 0.34
CCDC12-208ENST00000603885 NSG1A0A0A6YYJ2 146 aa17.18■□□□□ 0.34
CCDC12-208ENST00000603885 FAM95CA0A1B0GW59 222 aa17.18■□□□□ 0.34
CCDC12-208ENST00000603885 FEZF1A0PJY2 475 aa17.18■□□□□ 0.34
CCDC12-208ENST00000603885 H0YIG0 161 aa17.18■□□□□ 0.34
CCDC12-208ENST00000603885 NSA2O95478 260 aaKnown RBP17.18■□□□□ 0.34
CCDC12-208ENST00000603885 GUCA1CO95843 209 aa17.18■□□□□ 0.34
CCDC12-208ENST00000603885 MRPS25P82663 173 aaKnown RBP17.18■□□□□ 0.34
CCDC12-208ENST00000603885 MAT1AQ00266 395 aaKnown RBP17.18■□□□□ 0.34
CCDC12-208ENST00000603885 CBLBQ13191 982 aa17.18■□□□□ 0.34
CCDC12-208ENST00000603885 SYT16Q17RD7 645 aa17.18■□□□□ 0.34
CCDC12-208ENST00000603885 Q6ZS92 163 aa17.18■□□□□ 0.34
CCDC12-208ENST00000603885 NDUFAF7Q7L592 441 aa17.18■□□□□ 0.34
CCDC12-208ENST00000603885 MAATS1Q7Z4T9 603 aa17.18■□□□□ 0.34
CCDC12-208ENST00000603885 ZC3H7AQ8IWR0 971 aaKnown RBP17.18■□□□□ 0.34
CCDC12-208ENST00000603885 SPATA4Q8NEY3 305 aa17.18■□□□□ 0.34
CCDC12-208ENST00000603885 OR9A4Q8NGU2 314 aa17.18■□□□□ 0.34
CCDC12-208ENST00000603885 PYCR2Q96C36 320 aa17.18■□□□□ 0.34
CCDC12-208ENST00000603885 FBXL8Q96CD0 374 aa17.18■□□□□ 0.34
CCDC12-208ENST00000603885 WDR77Q9BQA1 342 aaPredicted RBP17.18■□□□□ 0.34
CCDC12-208ENST00000603885 ERP44Q9BS26 406 aa17.18■□□□□ 0.34
CCDC12-208ENST00000603885 DPH5Q9H2P9 285 aa17.18■□□□□ 0.34
CCDC12-208ENST00000603885 EPS8L2Q9H6S3 715 aa17.18■□□□□ 0.34
CCDC12-208ENST00000603885 WHRNQ9P202 907 aa17.18■□□□□ 0.34
CCDC12-208ENST00000603885 NOVA2Q9UNW9 492 aaKnown RBP17.18■□□□□ 0.34
CCDC12-208ENST00000603885 COX6A1P12074 109 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 CASQ1P31415 396 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 BCL6P41182 706 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 CCR8P51685 355 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 Q0VFX4 171 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 ILF2Q12905 390 aaKnown RBP17.17■□□□□ 0.34
CCDC12-208ENST00000603885 ZXDCQ2QGD7 858 aaPredicted RBP17.17■□□□□ 0.34
CCDC12-208ENST00000603885 FAAH2Q6GMR7 532 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 TMEM214Q6NUQ4 689 aaKnown RBP17.17■□□□□ 0.34
CCDC12-208ENST00000603885 SBSNQ6UWP8 590 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 IGFL2Q6UWQ7 119 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 TMEM207Q6UWW9 146 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 ASPGQ86U10 573 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 KBTBD2Q8IY47 623 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 NKAPQ8N5F7 415 aaKnown RBP17.17■□□□□ 0.34
CCDC12-208ENST00000603885 ABHD11Q8NFV4 315 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 PPP4R1Q8TF05 950 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 PYROXD1Q8WU10 500 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 SLC13A3Q8WWT9 602 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 ANKRD7Q92527 254 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 SNRNP40Q96DI7 357 aaKnown RBP17.17■□□□□ 0.34
CCDC12-208ENST00000603885 TM4SF19Q96DZ7 209 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 VPS39Q96JC1 886 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 MACROD1Q9BQ69 325 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 RHOJQ9H4E5 214 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 MKL2Q9ULH7 1088 aa17.17■□□□□ 0.34
CCDC12-208ENST00000603885 CNTRLQ7Z7A1 2325 aa17.16■□□□□ 0.34
CCDC12-208ENST00000603885 A0A1W2PQ72 361 aa17.16■□□□□ 0.34
CCDC12-208ENST00000603885 RAD51CO43502 376 aa17.16■□□□□ 0.34
CCDC12-208ENST00000603885 BMP10O95393 424 aa17.16■□□□□ 0.34
CCDC12-208ENST00000603885 SLC35G6P0C7Q6 338 aa17.16■□□□□ 0.34
CCDC12-208ENST00000603885 IL1RNP18510 177 aa17.16■□□□□ 0.34
CCDC12-208ENST00000603885 TAS2R39P59534 338 aa17.16■□□□□ 0.34
CCDC12-208ENST00000603885 EEF1A2Q05639 463 aaKnown RBP17.16■□□□□ 0.34
CCDC12-208ENST00000603885 SRSF1Q07955 248 aaKnown RBP eCLIP17.16■□□□□ 0.34
CCDC12-208ENST00000603885 ISLR2Q6UXK2 745 aa17.16■□□□□ 0.34
CCDC12-208ENST00000603885 CAPN12Q6ZSI9 719 aa17.16■□□□□ 0.34
CCDC12-208ENST00000603885 CISD2Q8N5K1 135 aaKnown RBP17.16■□□□□ 0.34
CCDC12-208ENST00000603885 TBC1D19Q8N5T2 526 aa17.16■□□□□ 0.34
CCDC12-208ENST00000603885 MFSD9Q8NBP5 474 aa17.16■□□□□ 0.34
CCDC12-208ENST00000603885 ZCCHC10Q8TBK6 192 aa17.16■□□□□ 0.34
CCDC12-208ENST00000603885 ANKHQ9HCJ1 492 aa17.16■□□□□ 0.34
CCDC12-208ENST00000603885 SAYSD1Q9NPB0 183 aa17.16■□□□□ 0.34
CCDC12-208ENST00000603885 RIC8BQ9NVN3 520 aa17.16■□□□□ 0.34
CCDC12-208ENST00000603885 IKZF3Q9UKT9 509 aa17.16■□□□□ 0.34
CCDC12-208ENST00000603885 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.16■□□□□ 0.34
CCDC12-208ENST00000603885 LOC102723996A0A087X1L8 192 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 IGHV1-45A0A0A0MS14 117 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 NPEPPSL1A6NEC2 478 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 TCP11X1B4DZS4 312 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 EIF3HO15372 352 aaKnown RBP eCLIP17.15■□□□□ 0.34
CCDC12-208ENST00000603885 LCMT2O60294 686 aaKnown RBP17.15■□□□□ 0.34
CCDC12-208ENST00000603885 SLC12A2P55011 1212 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 SNRPNP63162 240 aaKnown RBP17.15■□□□□ 0.34
CCDC12-208ENST00000603885 C2orf54Q08AI8 447 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 ZNF460Q14592 562 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 PPP1R3AQ16821 1122 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 PRSS41Q7RTY9 318 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 CUZD1Q86UP6 607 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 KCT2Q8NC54 265 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 OR4K1Q8NGD4 311 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 DNAJB14Q8TBM8 379 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 METTL21AQ8WXB1 218 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 CDKL2Q92772 493 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 C19orf60Q96EN9 201 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 OR4K3Q96R72 315 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 SARGQ9BW04 601 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms