RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 C14orf105Q9NVL8 296 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 ZSCAN32Q9NX65 697 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 TAS2R10Q9NYW0 307 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 USE1Q9NZ43 259 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 DENND4AQ7Z401 1863 aa8.61□□□□□ -1.03
COMMD3-215ENST00000602574 TOGARAM1Q9Y4F4 1720 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 RNF103-CHMP3A0A140T963 221 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 WASHC1A8K0Z3 465 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 HSPA12AO43301 675 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 KERAO60938 352 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 PCDH8O95206 1070 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 GSRP00390 522 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 FGF4P08620 206 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 PHKG2P15735 406 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 TYRP1P17643 537 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 TPH1P17752 444 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 FASP25445 335 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 ITGA3P26006 1051 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 CALCRP30988 508 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 RYKP34925 604 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 CDKN1BP46527 198 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 LHX1P48742 406 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 RGS6P49758 472 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 MEF2AQ02078 507 aaPredicted RBP8.6□□□□□ -1.03
COMMD3-215ENST00000602574 KCTD19Q17RG1 926 aaPredicted RBP8.6□□□□□ -1.03
COMMD3-215ENST00000602574 SLC35F1Q5T1Q4 408 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 PADI6Q6TGC4 694 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 ATRAIDQ6UW56 229 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 LAYNQ6UX15 382 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 KDELC2Q7Z4H8 507 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 DHFR2Q86XF0 187 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 OFCC1Q8IZS5 231 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 MS4A15Q8N5U1 240 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 C4orf32Q8N8J7 132 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 WDR36Q8NI36 951 aaKnown RBP8.6□□□□□ -1.03
COMMD3-215ENST00000602574 PXYLP1Q8TE99 480 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 TCTEX1D2Q8WW35 142 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 C22orf15Q8WYQ4 148 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 SLC30A2Q9BRI3 323 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 TRMOQ9BU70 441 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 BEX2Q9BXY8 128 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 SRRQ9GZT4 340 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 METTL8Q9H825 291 aaKnown RBP8.6□□□□□ -1.03
COMMD3-215ENST00000602574 MKNK2Q9HBH9 465 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 OSGEPQ9NPF4 335 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 FAM120CQ9NX05 1096 aaKnown RBP8.6□□□□□ -1.03
COMMD3-215ENST00000602574 GOLT1BQ9Y3E0 138 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 PRAMEF22A3QJZ6 481 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 SLC35F4A4IF30 521 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 ARHGEF33A8MVX0 844 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 EFCAB9A8MZ26 197 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 GPR89AB7ZAQ6 455 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 NFIBO00712 420 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 ZNF195O14628 629 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 PDCD5O14737 125 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 SLC43A1O75387 559 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 GATBO75879 557 aaKnown RBP8.6□□□□□ -1.03
COMMD3-215ENST00000602574 HPRP00739 348 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 LTFP02788 710 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 IQCF3P0C7M6 154 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 GPR89BP0CG08 455 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 ATXN8OSP0DMR3 200 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 MAPK3P27361 379 aaPredicted RBP8.6□□□□□ -1.03
COMMD3-215ENST00000602574 PPP2R1BP30154 601 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 ZNF280AP59817 542 aaPredicted RBP8.6□□□□□ -1.03
COMMD3-215ENST00000602574 NCS1P62166 190 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 SPP2Q13103 211 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 C6orf141Q5SZD1 244 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 HEPHL1Q6MZM0 1159 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 PPP1R18Q6NYC8 613 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 SCARA5Q6ZMJ2 495 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 ZNF783Q6ZMS7 281 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 GALNTL5Q7Z4T8 443 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 FAM160B2Q86V87 743 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 TRIM69Q86WT6 500 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 OR2L3Q8NG85 312 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 OR10A7Q8NGE5 316 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 OR2T4Q8NH00 348 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 MRPL38Q96DV4 380 aaKnown RBP8.6□□□□□ -1.03
COMMD3-215ENST00000602574 TRNT1Q96Q11 434 aaKnown RBP8.6□□□□□ -1.03
COMMD3-215ENST00000602574 SLC38A3Q99624 504 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 TOLLIPQ9H0E2 274 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 GFOD1Q9NXC2 390 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 VAPAQ9P0L0 249 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 CFAP97Q9P2B7 532 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 NUDT5Q9UKK9 219 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 KIAA1551Q9HCM1 1747 aa8.6□□□□□ -1.03
COMMD3-215ENST00000602574 TNS3Q68CZ2 1445 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 C2orf92A0A1B0GVN3 265 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 A0A1B0GW55 424 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 A0A1W2PPQ1 181 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 WASH3PC4AMC7 463 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 F5H6K3 240 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 GUSBP08236 651 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 ANXA5P08758 320 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 DUX4L2P0CJ85 424 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 DUX4L3P0CJ86 424 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 DUX4L4P0CJ87 422 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 DUX4L5P0CJ88 424 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 DUX4L6P0CJ89 424 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms