RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 ALAS2P22557 587 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 CNTFP26441 200 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 TNFRSF8P28908 595 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 GRK3P35626 688 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 MAGEA12P43365 314 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 SERPINB8P50452 374 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 SERPINB9P50453 376 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 CCR8P51685 355 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 DLG1Q12959 904 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 FAM53BQ14153 422 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 CSHL1Q14406 222 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 OR4D1Q15615 310 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 HKDC1Q2TB90 917 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 HIST2H2BCQ6DN03 193 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 RAPH1Q70E73 1250 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 COX15Q7KZN9 410 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 TAOK1Q7L7X3 1001 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 OVCH1Q7RTY7 1134 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 VN1R4Q7Z5H5 301 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 THOC6Q86W42 341 aaKnown RBP15.41■□□□□ 0.06
LSM4-206ENST00000600289 GPSM1Q86YR5 675 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 CNPY4Q8N129 248 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 APOBEC4Q8WW27 367 aaKnown RBP15.41■□□□□ 0.06
LSM4-206ENST00000600289 SLC5A11Q8WWX8 675 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.41■□□□□ 0.06
LSM4-206ENST00000600289 NACC2Q96BF6 587 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 PAFAH2Q99487 392 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 ARHGAP9Q9BRR9 750 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 CNOT10Q9H9A5 744 aaKnown RBP15.41■□□□□ 0.06
LSM4-206ENST00000600289 PELI2Q9HAT8 420 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 SNX15Q9NRS6 342 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 GEMIN8Q9NWZ8 242 aaKnown RBP15.41■□□□□ 0.06
LSM4-206ENST00000600289 NXT1Q9UKK6 140 aaKnown RBP15.41■□□□□ 0.06
LSM4-206ENST00000600289 ACOT9Q9Y305 439 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 DYRK1BQ9Y463 629 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 C2CD3Q4AC94 2353 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 TRBC2A0A5B9 178 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 P2RX6O15547 441 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 PRPF4O43172 522 aaKnown RBP eCLIP15.4■□□□□ 0.06
LSM4-206ENST00000600289 KERAO60938 352 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 ALDOAP04075 364 aaKnown RBP15.4■□□□□ 0.06
LSM4-206ENST00000600289 C2P06681 752 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 INHBAP08476 426 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 LTA4HP09960 611 aaKnown RBP15.4■□□□□ 0.06
LSM4-206ENST00000600289 PMS2P54278 862 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 POLE2P56282 527 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 BMPR2Q13873 1038 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 DEFB109BQ30KR1 87 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 MROH9Q5TGP6 573 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 MLIPQ5VWP3 458 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 SULT1C3Q6IMI6 304 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 ISCA2Q86U28 154 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 RAB43Q86YS6 212 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 PLD3Q8IV08 490 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 CENPLQ8N0S6 344 aaPredicted RBP15.4■□□□□ 0.06
LSM4-206ENST00000600289 SPATA6LQ8N4H0 392 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 MFSD9Q8NBP5 474 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 RHEBL1Q8TAI7 183 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 STAG3L4Q8TBR4 150 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 NEIL2Q969S2 332 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 ALKBH8Q96BT7 664 aaKnown RBP15.4■□□□□ 0.06
LSM4-206ENST00000600289 CABS1Q96KC9 395 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 IP6K3Q96PC2 410 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 ATOH8Q96SQ7 321 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 TMEM79Q9BSE2 394 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 CAPS2Q9BXY5 557 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 ZNF304Q9HCX3 659 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 GPRC5BQ9NZH0 403 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 NUDT4Q9NZJ9 180 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 CDC14AQ9UNH5 594 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 SLC22A14Q9Y267 594 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 KCNE2Q9Y6J6 123 aa15.4■□□□□ 0.06
LSM4-206ENST00000600289 IGLV3-12A0A075B6K2 115 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 VSTM2BA6NLU5 285 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 RIPK2O43353 540 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 TFEBP19484 476 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 BCL6P41182 706 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 FOLR3P41439 243 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 REEP5Q00765 189 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 DSG2Q14126 1118 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 SSPNQ14714 243 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 UAP1Q16222 522 aaPredicted RBP15.39■□□□□ 0.05
LSM4-206ENST00000600289 NKG7Q16617 165 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 NDUFA9Q16795 377 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 FAM83EQ2M2I3 478 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 TBC1D19Q8N5T2 526 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 CAMKVQ8NCB2 501 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 DCAKDQ8WVC6 231 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 SPSB2Q99619 263 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 UNKQ9C0B0 810 aaKnown RBP15.39■□□□□ 0.05
LSM4-206ENST00000600289 COPG2Q9UBF2 871 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 FETUBQ9UGM5 382 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 PTBP2Q9UKA9 531 aaKnown RBP15.39■□□□□ 0.05
LSM4-206ENST00000600289 RNF112Q9ULX5 631 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 IKBKGQ9Y6K9 419 aa15.39■□□□□ 0.05
LSM4-206ENST00000600289 A0A096LPK6 155 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 TAPBPO15533 448 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 LCMT2O60294 686 aaKnown RBP15.38■□□□□ 0.05
LSM4-206ENST00000600289 WDR47O94967 919 aa15.38■□□□□ 0.05
LSM4-206ENST00000600289 KLHL2O95198 593 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms