RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 LIASO43766 372 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 LCMT2O60294 686 aaKnown RBP5.75□□□□□ -1.49
VRK3-220ENST00000600259 VPS26AO75436 327 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 NDUFS3O75489 264 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 TOXO94900 526 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 SLC16A8O95907 504 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 STATHP02808 62 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 ANXA5P08758 320 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 ZSCAN5DPP0CG00 497 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 ERVK-10P10266 1014 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 PKMP14618 531 aaKnown RBP5.75□□□□□ -1.49
VRK3-220ENST00000600259 EZRP15311 586 aaKnown RBP5.75□□□□□ -1.49
VRK3-220ENST00000600259 FMO4P31512 558 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 RPL22P35268 128 aaKnown RBP5.75□□□□□ -1.49
VRK3-220ENST00000600259 CETN2P41208 172 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 SKIV2L2P42285 1042 aaKnown RBP5.75□□□□□ -1.49
VRK3-220ENST00000600259 NR0B1P51843 470 aaKnown RBP5.75□□□□□ -1.49
VRK3-220ENST00000600259 PNLIPRP1P54315 467 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 CASP6P55212 293 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 ADARP55265 1226 aaKnown RBP5.75□□□□□ -1.49
VRK3-220ENST00000600259 EIF3BP55884 814 aaKnown RBP5.75□□□□□ -1.49
VRK3-220ENST00000600259 ABATP80404 500 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 RHAGQ02094 409 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 KCNJ11Q14654 390 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 NAA25Q14CX7 972 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 SPA17Q15506 151 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 MEP1AQ16819 746 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 TYSND1Q2T9J0 566 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 KLHL38Q2WGJ6 581 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 BTBD16Q32M84 506 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 AARS2Q5JTZ9 985 aaKnown RBP5.75□□□□□ -1.49
VRK3-220ENST00000600259 SLC25A25Q6KCM7 469 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 TMEM214Q6NUQ4 689 aaKnown RBP5.75□□□□□ -1.49
VRK3-220ENST00000600259 CES3Q6UWW8 571 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 PPP1R21Q6ZMI0 780 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 C3P1Q6ZMU1 363 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 MEX3BQ6ZN04 569 aaKnown RBP5.75□□□□□ -1.49
VRK3-220ENST00000600259 CENPUQ71F23 418 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 PDSS2Q86YH6 399 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 REXO1L1PQ8IX06 675 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 LGI4Q8N135 537 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 ARMC10Q8N2F6 343 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 MPP5Q8N3R9 675 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 PPFIBP2Q8ND30 876 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 OR51Q1Q8NH59 317 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 LILRB4Q8NHJ6 448 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 MAGEC3Q8TD91 643 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 ELP5Q8TE02 316 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 ASB11Q8WXH4 323 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 SDCCAG3Q96C92 435 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 MFSD3Q96ES6 412 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 MRFAP1L1Q96HT8 127 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 HES6Q96HZ4 224 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 MAGED4Q96JG8 741 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 FOPNLQ96NB1 174 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 PRAP1Q96NZ9 151 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 OLFM1Q99784 485 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 MACROD1Q9BQ69 325 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 UTP23Q9BRU9 249 aaKnown RBP5.75□□□□□ -1.49
VRK3-220ENST00000600259 KIFC1Q9BW19 673 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 KCNK13Q9HB14 408 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 RAB6BQ9NRW1 208 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 PLSCR2Q9NRY7 297 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 ANKRD10Q9NXR5 420 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 TAC3Q9UHF0 121 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 PCYOX1Q9UHG3 505 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 GNPTGQ9UJJ9 305 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 ANAPC5Q9UJX4 755 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 AMFRQ9UKV5 643 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 SCN2AQ99250 2005 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 AKAP6Q13023 2319 aa5.75□□□□□ -1.49
VRK3-220ENST00000600259 FEZF1A0PJY2 475 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 GOLGA6L9A6NEM1 432 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 GABRR3A8MPY1 467 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 MIF4GDA9UHW6 222 aaKnown RBP5.74□□□□□ -1.49
VRK3-220ENST00000600259 GOLGA8KD6RF30 607 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 GOLGA8TH3BQL2 631 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 SGK494L7N484 410 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 SMAPO00193 183 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 NME2P1O60361 137 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 VAPBO95292 243 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 FTCDO95954 541 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 GAS8O95995 478 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 ESR1P03372 595 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 APRTP07741 180 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 CD46P15529 392 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 CD1EP15812 388 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 IL1RNP18510 177 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 NME2P22392 152 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 EEF1DP29692 281 aaKnown RBP5.74□□□□□ -1.49
VRK3-220ENST00000600259 TRHRP34981 398 aaPredicted RBP5.74□□□□□ -1.49
VRK3-220ENST00000600259 PTGER1P34995 402 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 RPA3P35244 121 aaPredicted RBP5.74□□□□□ -1.49
VRK3-220ENST00000600259 CYLC1P35663 651 aaPredicted RBP5.74□□□□□ -1.49
VRK3-220ENST00000600259 HSD17B2P37059 387 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 XCR1P46094 333 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 NPY2RP49146 381 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 AGTR2P50052 363 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 CLCN7P51798 805 aa5.74□□□□□ -1.49
VRK3-220ENST00000600259 SESN2P58004 480 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms