RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 TSFMP43897 325 aaKnown RBP17.8■□□□□ 0.44
PNKP-213ENST00000599543 ATG9BQ674R7 924 aa17.8■□□□□ 0.44
PNKP-213ENST00000599543 B3GNTL1Q67FW5 361 aaPredicted RBP17.8■□□□□ 0.44
PNKP-213ENST00000599543 NDUFAF7Q7L592 441 aa17.8■□□□□ 0.44
PNKP-213ENST00000599543 LAPTM4BQ86VI4 370 aa17.8■□□□□ 0.44
PNKP-213ENST00000599543 CD200R1Q8TD46 325 aa17.8■□□□□ 0.44
PNKP-213ENST00000599543 LRRC39Q96DD0 335 aa17.8■□□□□ 0.44
PNKP-213ENST00000599543 NDNQ99608 321 aa17.8■□□□□ 0.44
PNKP-213ENST00000599543 FAM167BQ9BTA0 163 aa17.8■□□□□ 0.44
PNKP-213ENST00000599543 NAT9Q9BTE0 207 aa17.8■□□□□ 0.44
PNKP-213ENST00000599543 SYNPO2LQ9H987 977 aa17.8■□□□□ 0.44
PNKP-213ENST00000599543 MKKSQ9NPJ1 570 aaPredicted RBP17.8■□□□□ 0.44
PNKP-213ENST00000599543 ZDHHC18Q9NUE0 388 aa17.8■□□□□ 0.44
PNKP-213ENST00000599543 DHRS7Q9Y394 339 aa17.8■□□□□ 0.44
PNKP-213ENST00000599543 CRYBG3Q68DQ2 2970 aa17.8■□□□□ 0.44
PNKP-213ENST00000599543 CPAMD8Q8IZJ3 1885 aa17.8■□□□□ 0.44
PNKP-213ENST00000599543 GFYI3L273 518 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 NDC80O14777 642 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 HAT1O14929 419 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 HEXBP07686 556 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 UQCRHP07919 91 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 RHOXF2BP0C7M4 288 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 COX6A1P12074 109 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 GABRB3P28472 473 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 SSTR1P30872 391 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 SLC26A3P40879 764 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 PGGT1BP53609 377 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 EMP2P54851 167 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 RELAQ04206 551 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 EEF1A2Q05639 463 aaKnown RBP17.79■□□□□ 0.44
PNKP-213ENST00000599543 MFAP5Q13361 173 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 UBE2R2Q712K3 238 aaPredicted RBP17.79■□□□□ 0.44
PNKP-213ENST00000599543 PIWIL4Q7Z3Z4 852 aaKnown RBP17.79■□□□□ 0.44
PNKP-213ENST00000599543 CPNE9Q8IYJ1 553 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 AMER3Q8N944 861 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 ST6GALNAC3Q8NDV1 305 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 PYROXD1Q8WU10 500 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 RHOXF2Q9BQY4 288 aa17.79■□□□□ 0.44
PNKP-213ENST00000599543 ITPR2Q14571 2701 aa17.78■□□□□ 0.44
PNKP-213ENST00000599543 A0A0A6YYC8 382 aaPredicted RBP17.78■□□□□ 0.44
PNKP-213ENST00000599543 I3L1I5 382 aaPredicted RBP17.78■□□□□ 0.44
PNKP-213ENST00000599543 EIF3FO00303 357 aaPredicted RBP17.78■□□□□ 0.44
PNKP-213ENST00000599543 PCDH17O14917 1159 aa17.78■□□□□ 0.44
PNKP-213ENST00000599543 LDLRP01130 860 aa17.78■□□□□ 0.44
PNKP-213ENST00000599543 FDXRP22570 491 aa17.78■□□□□ 0.44
PNKP-213ENST00000599543 IMPA1P29218 277 aa17.78■□□□□ 0.44
PNKP-213ENST00000599543 SKIV2L2P42285 1042 aaKnown RBP17.78■□□□□ 0.44
PNKP-213ENST00000599543 ARG2P78540 354 aa17.78■□□□□ 0.44
PNKP-213ENST00000599543 NDUFA9Q16795 377 aa17.78■□□□□ 0.44
PNKP-213ENST00000599543 RBM20Q5T481 1227 aaKnown RBP17.78■□□□□ 0.44
PNKP-213ENST00000599543 UBAP2Q5T6F2 1119 aaKnown RBP17.78■□□□□ 0.44
PNKP-213ENST00000599543 TEDDM1Q5T9Z0 273 aa17.78■□□□□ 0.44
PNKP-213ENST00000599543 FAAH2Q6GMR7 532 aa17.78■□□□□ 0.44
PNKP-213ENST00000599543 LRRC8EQ6NSJ5 796 aa17.78■□□□□ 0.44
PNKP-213ENST00000599543 LRRC56Q8IYG6 542 aaPredicted RBP17.78■□□□□ 0.44
PNKP-213ENST00000599543 C2CD4AQ8NCU7 369 aaPredicted RBP17.78■□□□□ 0.44
PNKP-213ENST00000599543 GRHL3Q8TE85 626 aa17.78■□□□□ 0.44
PNKP-213ENST00000599543 LMF1Q96S06 567 aa17.78■□□□□ 0.44
PNKP-213ENST00000599543 TGIF2Q9GZN2 237 aa17.78■□□□□ 0.44
PNKP-213ENST00000599543 CCDC177Q9NQR7 707 aaPredicted RBP17.78■□□□□ 0.44
PNKP-213ENST00000599543 SMYD2Q9NRG4 433 aa17.78■□□□□ 0.44
PNKP-213ENST00000599543 RIC8BQ9NVN3 520 aa17.78■□□□□ 0.44
PNKP-213ENST00000599543 TRMT6Q9UJA5 497 aaKnown RBP17.78■□□□□ 0.44
PNKP-213ENST00000599543 PSAT1Q9Y617 370 aa17.78■□□□□ 0.44
PNKP-213ENST00000599543 SCN3AQ9NY46 2000 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 IGHV1-45A0A0A0MS14 117 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 DYTNA2CJ06 578 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 ESPNB1AK53 854 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 H7BY64 318 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 P2RX6O15547 441 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 KLHL18O94889 574 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 PRR35P0CG20 571 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 AVPR1BP47901 424 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 GPX6P59796 221 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 TBPL1P62380 186 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 CAV1Q03135 178 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 FAM53BQ14153 422 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 UGT3A1Q6NUS8 523 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 FAM180AQ6UWF9 173 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 CYHR1Q6ZMK1 362 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 MAMDC2Q7Z304 686 aaPredicted RBP17.77■□□□□ 0.44
PNKP-213ENST00000599543 PLD3Q8IV08 490 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 PALM2Q8IXS6 379 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 GABPB2Q8TAK5 448 aaPredicted RBP17.77■□□□□ 0.44
PNKP-213ENST00000599543 BRIX1Q8TDN6 353 aaKnown RBP17.77■□□□□ 0.44
PNKP-213ENST00000599543 FAR1Q8WVX9 515 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 PRAP1Q96NZ9 151 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 AARSD1Q9BTE6 412 aaKnown RBP17.77■□□□□ 0.44
PNKP-213ENST00000599543 PTGFRNQ9P2B2 879 aa17.77■□□□□ 0.44
PNKP-213ENST00000599543 SCN2AQ99250 2005 aa17.77■□□□□ 0.43
PNKP-213ENST00000599543 CACNA1DQ01668 2161 aa17.77■□□□□ 0.43
PNKP-213ENST00000599543 A0A1W2PQ72 361 aa17.76■□□□□ 0.43
PNKP-213ENST00000599543 WIPF3A6NGB9 483 aa17.76■□□□□ 0.43
PNKP-213ENST00000599543 CXorf49A8MYA2 514 aaPredicted RBP17.76■□□□□ 0.43
PNKP-213ENST00000599543 FOXS1O43638 330 aa17.76■□□□□ 0.43
PNKP-213ENST00000599543 ZNF500O60304 480 aaPredicted RBP17.76■□□□□ 0.43
PNKP-213ENST00000599543 AHSGP02765 367 aa17.76■□□□□ 0.43
PNKP-213ENST00000599543 SERPINA7P05543 415 aa17.76■□□□□ 0.43
PNKP-213ENST00000599543 HRH2P25021 359 aa17.76■□□□□ 0.43
PNKP-213ENST00000599543 DEKP35659 375 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms