RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 SLC2A4P14672 509 aa10.07□□□□□ -0.8
SMG9-207ENST00000598860 EPHA8P29322 1005 aaPredicted RBP10.07□□□□□ -0.8
SMG9-207ENST00000598860 CCR7P32248 378 aa10.07□□□□□ -0.8
SMG9-207ENST00000598860 ATP6V0D1P61421 351 aa10.07□□□□□ -0.8
SMG9-207ENST00000598860 HNRNPKP61978 463 aaKnown RBP eCLIP10.07□□□□□ -0.8
SMG9-207ENST00000598860 EIF2B5Q13144 721 aaKnown RBP10.07□□□□□ -0.8
SMG9-207ENST00000598860 BOP1Q14137 746 aaKnown RBP10.07□□□□□ -0.8
SMG9-207ENST00000598860 TPRG1LQ5T0D9 272 aa10.07□□□□□ -0.8
SMG9-207ENST00000598860 KLC3Q6P597 504 aa10.07□□□□□ -0.8
SMG9-207ENST00000598860 CMC1Q7Z7K0 106 aa10.07□□□□□ -0.8
SMG9-207ENST00000598860 C11orf96Q7Z7L8 435 aa10.07□□□□□ -0.8
SMG9-207ENST00000598860 CEP97Q8IW35 865 aa10.07□□□□□ -0.8
SMG9-207ENST00000598860 SRRM1Q8IYB3 904 aaKnown RBP10.07□□□□□ -0.8
SMG9-207ENST00000598860 SIDT2Q8NBJ9 832 aaKnown RBP10.07□□□□□ -0.8
SMG9-207ENST00000598860 ADAMTS14Q8WXS8 1223 aa10.07□□□□□ -0.8
SMG9-207ENST00000598860 PDLIM5Q96HC4 596 aaKnown RBP10.07□□□□□ -0.8
SMG9-207ENST00000598860 ATP6V1G3Q96LB4 118 aa10.07□□□□□ -0.8
SMG9-207ENST00000598860 SCNM1Q9BWG6 230 aa10.07□□□□□ -0.8
SMG9-207ENST00000598860 VPS11Q9H270 941 aa10.07□□□□□ -0.8
SMG9-207ENST00000598860 COG4Q9H9E3 785 aa10.07□□□□□ -0.8
SMG9-207ENST00000598860 CAB39LQ9H9S4 337 aa10.07□□□□□ -0.8
SMG9-207ENST00000598860 SPASTQ9UBP0 616 aa10.07□□□□□ -0.8
SMG9-207ENST00000598860 APOBEC3BQ9UH17 382 aaKnown RBP10.07□□□□□ -0.8
SMG9-207ENST00000598860 DCDC2Q9UHG0 476 aa10.07□□□□□ -0.8
SMG9-207ENST00000598860 ACSL5Q9ULC5 683 aa10.07□□□□□ -0.8
SMG9-207ENST00000598860 WASF3Q9UPY6 502 aa10.07□□□□□ -0.8
SMG9-207ENST00000598860 PHGDHO43175 533 aaKnown RBP10.06□□□□□ -0.8
SMG9-207ENST00000598860 PEX14O75381 377 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 SLCO2B1O94956 709 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 KLHL2O95198 593 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 ENO2P09104 434 aaPredicted RBP10.06□□□□□ -0.8
SMG9-207ENST00000598860 LTA4HP09960 611 aaKnown RBP10.06□□□□□ -0.8
SMG9-207ENST00000598860 SLC35E2BP0CK96 405 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 CTSEP14091 401 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 ITGB6P18564 788 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 KRT4P19013 534 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 IDSP22304 550 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 PBLDP30039 288 aaPredicted RBP10.06□□□□□ -0.8
SMG9-207ENST00000598860 CCT5P48643 541 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 TIAL1Q01085 375 aaKnown RBP eCLIP10.06□□□□□ -0.8
SMG9-207ENST00000598860 SLC18A2Q05940 514 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 HSPA14Q0VDF9 509 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 SP140Q13342 867 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 ELOCQ15369 112 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 FAM83EQ2M2I3 478 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 MUM1Q2TAK8 710 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 ZNF658BQ4V348 819 aaPredicted RBP10.06□□□□□ -0.8
SMG9-207ENST00000598860 CCDC157Q569K6 752 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 AGAP9Q5VTM2 703 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 VASNQ6EMK4 673 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 WASH2PQ6VEQ5 465 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 CHST15Q7LFX5 561 aaPredicted RBP10.06□□□□□ -0.8
SMG9-207ENST00000598860 RD3Q7Z3Z2 195 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 PIM3Q86V86 326 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 CPNE9Q8IYJ1 553 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 SLC22A15Q8IZD6 547 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 FAM26EQ8N5C1 309 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 ACVR1CQ8NER5 493 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 TSACCQ96A04 125 aaPredicted RBP10.06□□□□□ -0.8
SMG9-207ENST00000598860 TLCD1Q96CP7 247 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 APOPT1Q96IL0 206 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 CNDP2Q96KP4 475 aaKnown RBP10.06□□□□□ -0.8
SMG9-207ENST00000598860 UBXN10Q96LJ8 280 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 DERL2Q9GZP9 239 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 IQCGQ9H095 443 aaKnown RBP10.06□□□□□ -0.8
SMG9-207ENST00000598860 NMRAL1Q9HBL8 299 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 MRPL40Q9NQ50 206 aaKnown RBP10.06□□□□□ -0.8
SMG9-207ENST00000598860 WASH6PQ9NQA3 447 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 KLC4Q9NSK0 619 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 MID2Q9UJV3 735 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 NEUROG3Q9Y4Z2 214 aa10.06□□□□□ -0.8
SMG9-207ENST00000598860 A0A1W2PPM1 405 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 NEMP2A6NFY4 417 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 OR5K4A6NMS3 321 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 IFRD1O00458 451 aaPredicted RBP10.05□□□□□ -0.8
SMG9-207ENST00000598860 COPEO14579 308 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 SDC3O75056 442 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 PIAS2O75928 621 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 C8GP07360 202 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 SLC35G4P0C7Q5 338 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 HALP42357 657 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 LGALS4P56470 323 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 TRIM25Q14258 630 aaKnown RBP10.05□□□□□ -0.8
SMG9-207ENST00000598860 CSHL1Q14406 222 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 NFE2L1Q14494 772 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 ZNF542PQ5EBM4 170 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 ACSBG2Q5FVE4 666 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 METRNLQ641Q3 311 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 UNC5DQ6UXZ4 953 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 CLEC14AQ86T13 490 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 ADAMTSL2Q86TH1 951 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 EXOC3L1Q86VI1 746 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 GKN2Q86XP6 184 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 LYSMD2Q8IV50 215 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 CFAP206Q8IYR0 622 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 SLC25A45Q8N413 288 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 AVL9Q8NBF6 648 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 FAM136AQ96C01 138 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 LINGO1Q96FE5 620 aa10.05□□□□□ -0.8
SMG9-207ENST00000598860 FOPNLQ96NB1 174 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms