RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 STATHP02808 62 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 NTRK1P04629 796 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 JMJD7P0C870 316 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 SMIM10L1P0DMW3 83 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 EPB42P16452 691 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 SLC18A1P54219 525 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 NAGLUP54802 743 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 VSX2P58304 361 aaPredicted RBP10.09□□□□□ -0.79
LIG1-210ENST00000596332 SLBPQ14493 270 aaKnown RBP eCLIP10.09□□□□□ -0.79
LIG1-210ENST00000596332 TBC1D25Q3MII6 688 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 GLIPR1L2Q4G1C9 344 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 LETMD1Q6P1Q0 360 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 TMPRSS11BQ86T26 416 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 BPHLQ86WA6 291 aaPredicted RBP10.09□□□□□ -0.79
LIG1-210ENST00000596332 LAS2Q8IYD9 372 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 RNF175Q8N4F7 328 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 OR8K5Q8NH50 307 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 WDR20Q8TBZ3 569 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 SMIM10Q96HG1 83 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 ATP6V1G3Q96LB4 118 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 CDK15Q96Q40 435 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 SMC6Q96SB8 1091 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 C20orf27Q9GZN8 174 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 ZMYND15Q9H091 742 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 RHBGQ9H310 441 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 CENPHQ9H3R5 247 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 KLHL31Q9H511 634 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 ARGLU1Q9NWB6 273 aaPredicted RBP10.09□□□□□ -0.79
LIG1-210ENST00000596332 RARRES3Q9UL19 164 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 RUVBL1Q9Y265 456 aaKnown RBP10.09□□□□□ -0.79
LIG1-210ENST00000596332 PCDHB3Q9Y5E6 796 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 AP1M2Q9Y6Q5 423 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 SDK2Q58EX2 2172 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 CNOT3O75175 753 aaKnown RBP10.08□□□□□ -0.8
LIG1-210ENST00000596332 BPGMP07738 259 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 MYL2P10916 166 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 TAC1P20366 129 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 ITGA1P56199 1179 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 RAB15P59190 212 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 RPS15AP62244 130 aaKnown RBP10.08□□□□□ -0.8
LIG1-210ENST00000596332 CLCQ05315 142 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 GPS2Q13227 327 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 TGIF1Q15583 401 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 ADPRMQ3LIE5 342 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 XKR6Q5GH73 641 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 ZC3H12BQ5HYM0 836 aaKnown RBP10.08□□□□□ -0.8
LIG1-210ENST00000596332 TMTC4Q5T4D3 741 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 DCAF12Q5T6F0 453 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 TMEM214Q6NUQ4 689 aaKnown RBP10.08□□□□□ -0.8
LIG1-210ENST00000596332 CEACAM20Q6UY09 585 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 UBE3DQ7Z6J8 389 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 SYVN1Q86TM6 617 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 PPP1R3BQ86XI6 285 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.08□□□□□ -0.8
LIG1-210ENST00000596332 AFAP1L2Q8N4X5 818 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 ZNF655Q8N720 491 aaPredicted RBP10.08□□□□□ -0.8
LIG1-210ENST00000596332 SNX31Q8N9S9 440 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 KCT2Q8NC54 265 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 OR7G3Q8NG95 312 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 OR4F6Q8NGB9 312 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 TRPC4APQ8TEL6 797 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 NKD1Q969G9 470 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 THAP11Q96EK4 314 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 PTCD3Q96EY7 689 aaKnown RBP10.08□□□□□ -0.8
LIG1-210ENST00000596332 ZNF578Q96N58 590 aaPredicted RBP10.08□□□□□ -0.8
LIG1-210ENST00000596332 GBP5Q96PP8 586 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 TEFMQ96QE5 360 aaKnown RBP10.08□□□□□ -0.8
LIG1-210ENST00000596332 CAPS2Q9BXY5 557 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 ASPSCR1Q9BZE9 553 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 SLC6A16Q9GZN6 736 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 ZNF395Q9H8N7 513 aaPredicted RBP10.08□□□□□ -0.8
LIG1-210ENST00000596332 SEMA4BQ9NPR2 832 aaPredicted RBP10.08□□□□□ -0.8
LIG1-210ENST00000596332 DHCR7Q9UBM7 475 aaKnown RBP10.08□□□□□ -0.8
LIG1-210ENST00000596332 ZFP69BQ9UJL9 534 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 TSC22D4Q9Y3Q8 395 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 DYRK1BQ9Y463 629 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 AK5Q9Y6K8 562 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 IGF2RP11717 2491 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 ZZEF1O43149 2961 aa10.08□□□□□ -0.8
LIG1-210ENST00000596332 TMEM120BA0PK00 339 aa10.07□□□□□ -0.8
LIG1-210ENST00000596332 H0YIV9 168 aa10.07□□□□□ -0.8
LIG1-210ENST00000596332 CLGNO14967 610 aa10.07□□□□□ -0.8
LIG1-210ENST00000596332 OR1F1O43749 312 aa10.07□□□□□ -0.8
LIG1-210ENST00000596332 RRP9O43818 475 aaKnown RBP10.07□□□□□ -0.8
LIG1-210ENST00000596332 TRIM13O60858 407 aa10.07□□□□□ -0.8
LIG1-210ENST00000596332 SCRG1O75711 98 aa10.07□□□□□ -0.8
LIG1-210ENST00000596332 OR2B3O76000 313 aa10.07□□□□□ -0.8
LIG1-210ENST00000596332 STK17BO94768 372 aa10.07□□□□□ -0.8
LIG1-210ENST00000596332 KIAA0754O94854 1291 aa10.07□□□□□ -0.8
LIG1-210ENST00000596332 SUPT7LO94864 414 aa10.07□□□□□ -0.8
LIG1-210ENST00000596332 KLHL18O94889 574 aa10.07□□□□□ -0.8
LIG1-210ENST00000596332 ETHE1O95571 254 aa10.07□□□□□ -0.8
LIG1-210ENST00000596332 B3GALT4O96024 378 aa10.07□□□□□ -0.8
LIG1-210ENST00000596332 S100BP04271 92 aaPredicted RBP10.07□□□□□ -0.8
LIG1-210ENST00000596332 WT1P19544 449 aaPredicted RBP10.07□□□□□ -0.8
LIG1-210ENST00000596332 F8A1P23610 371 aa10.07□□□□□ -0.8
LIG1-210ENST00000596332 AHRP35869 848 aa10.07□□□□□ -0.8
LIG1-210ENST00000596332 SERPINB4P48594 390 aa10.07□□□□□ -0.8
LIG1-210ENST00000596332 ARL4DP49703 201 aa10.07□□□□□ -0.8
LIG1-210ENST00000596332 NEK2P51955 445 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms