RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 CCNT2O60583 730 aaKnown RBP24.57■■□□□ 1.52
TRIM28-204ENST00000594806 GSTM2P28161 218 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 PTPN4P29074 926 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 BCL6P41182 706 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 PCDH1Q08174 1060 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 IFFO1Q0D2I5 559 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 FAM53BQ14153 422 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 PCBP2Q15366 365 aaKnown RBP eCLIP24.57■■□□□ 1.522e-8■■■■■ 27.9
TRIM28-204ENST00000594806 PFKFB4Q16877 469 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 NKAIN1Q4KMZ8 207 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 FAM199XQ6PEV8 388 aaPredicted RBP24.57■■□□□ 1.52
TRIM28-204ENST00000594806 SLCO4C1Q6ZQN7 724 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 VN1R4Q7Z5H5 301 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 ASPGQ86U10 573 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 KRT78Q8N1N4 520 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 SNX31Q8N9S9 440 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 SEC16BQ96JE7 1060 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 NT5DC2Q9H857 520 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 XPR1Q9UBH6 696 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 NDOR1Q9UHB4 597 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 IL17BQ9UHF5 180 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 RUVBL1Q9Y265 456 aaKnown RBP24.57■■□□□ 1.52
TRIM28-204ENST00000594806 PADI2Q9Y2J8 665 aa24.57■■□□□ 1.52
TRIM28-204ENST00000594806 FEZF1A0PJY2 475 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 OR1F1O43749 312 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 LCMT2O60294 686 aaKnown RBP24.56■■□□□ 1.52
TRIM28-204ENST00000594806 SMIM24O75264 130 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 SLC35G6P0C7Q6 338 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 KRT15P19012 456 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 F8A1P23610 371 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 SLCO1A2P46721 670 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 SCTRP47872 440 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 PWP1Q13610 501 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 NAA30Q147X3 362 aaPredicted RBP24.56■■□□□ 1.52
TRIM28-204ENST00000594806 TBCCQ15814 346 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 ARHGAP40Q5TG30 622 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 C1orf189Q5VU69 101 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 FAM198BQ6UWH4 519 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 TTLQ8NG68 377 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 EPS8L3Q8TE67 593 aaKnown RBP24.56■■□□□ 1.52
TRIM28-204ENST00000594806 SLC13A3Q8WWT9 602 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 STARD8Q92502 1023 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 ESAMQ96AP7 390 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 FKBP10Q96AY3 582 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 WDR34Q96EX3 536 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 SYNPO2LQ9H987 977 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 CPSF2Q9P2I0 782 aaKnown RBP24.56■■□□□ 1.52
TRIM28-204ENST00000594806 COPG2Q9UBF2 871 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 GPN3Q9UHW5 284 aaPredicted RBP24.56■■□□□ 1.52
TRIM28-204ENST00000594806 ZFP69BQ9UJL9 534 aa24.56■■□□□ 1.52
TRIM28-204ENST00000594806 KMT2BQ9UMN6 2715 aaPredicted RBP24.55■■□□□ 1.52
TRIM28-204ENST00000594806 STX16-NPEPL1H3BU86 382 aa24.55■■□□□ 1.52
TRIM28-204ENST00000594806 STX16O14662 325 aa24.55■■□□□ 1.52
TRIM28-204ENST00000594806 PRPF4O43172 522 aaKnown RBP eCLIP24.55■■□□□ 1.521e-9■■■□□ 18.4
TRIM28-204ENST00000594806 KATNA1O75449 491 aa24.55■■□□□ 1.52
TRIM28-204ENST00000594806 ALBP02768 609 aa24.55■■□□□ 1.52
TRIM28-204ENST00000594806 CAPN1P07384 714 aa24.55■■□□□ 1.52
TRIM28-204ENST00000594806 PYGBP11216 843 aa24.55■■□□□ 1.52
TRIM28-204ENST00000594806 EPB42P16452 691 aa24.55■■□□□ 1.52
TRIM28-204ENST00000594806 WT1P19544 449 aaPredicted RBP24.55■■□□□ 1.52
TRIM28-204ENST00000594806 PIK3CGP48736 1102 aa24.55■■□□□ 1.52
TRIM28-204ENST00000594806 LAPTM5Q13571 262 aa24.55■■□□□ 1.52
TRIM28-204ENST00000594806 NCF4Q15080 339 aa24.55■■□□□ 1.52
TRIM28-204ENST00000594806 HKDC1Q2TB90 917 aa24.55■■□□□ 1.52
TRIM28-204ENST00000594806 SYVN1Q86TM6 617 aa24.55■■□□□ 1.52
TRIM28-204ENST00000594806 TRPV3Q8NET8 790 aa24.55■■□□□ 1.52
TRIM28-204ENST00000594806 PTCD3Q96EY7 689 aaKnown RBP24.55■■□□□ 1.52
TRIM28-204ENST00000594806 C10orf90Q96M02 699 aa24.55■■□□□ 1.52
TRIM28-204ENST00000594806 EFCAB11Q9BUY7 163 aa24.55■■□□□ 1.52
TRIM28-204ENST00000594806 IFT80Q9P2H3 777 aaPredicted RBP24.55■■□□□ 1.52
TRIM28-204ENST00000594806 SMIM23A6NLE4 172 aa24.54■■□□□ 1.52
TRIM28-204ENST00000594806 CREG1O75629 220 aa24.54■■□□□ 1.52
TRIM28-204ENST00000594806 CASP2P42575 452 aa24.54■■□□□ 1.52
TRIM28-204ENST00000594806 AGTR2P50052 363 aa24.54■■□□□ 1.52
TRIM28-204ENST00000594806 MEF2AQ02078 507 aaPredicted RBP24.54■■□□□ 1.52
TRIM28-204ENST00000594806 E2F2Q14209 437 aa24.54■■□□□ 1.52
TRIM28-204ENST00000594806 FBXO48Q5FWF7 155 aa24.54■■□□□ 1.52
TRIM28-204ENST00000594806 PAGE2BQ5JRK9 111 aa24.54■■□□□ 1.52
TRIM28-204ENST00000594806 LCN10Q6JVE6 187 aa24.54■■□□□ 1.52
TRIM28-204ENST00000594806 ARHGEF39Q8N4T4 335 aa24.54■■□□□ 1.52
TRIM28-204ENST00000594806 CATSPER2Q96P56 530 aa24.54■■□□□ 1.52
TRIM28-204ENST00000594806 TMEM109Q9BVC6 243 aa24.54■■□□□ 1.52
TRIM28-204ENST00000594806 GEMIN8Q9NWZ8 242 aaKnown RBP24.54■■□□□ 1.52
TRIM28-204ENST00000594806 ANGPTL3Q9Y5C1 460 aa24.54■■□□□ 1.52
TRIM28-204ENST00000594806 P2RX6O15547 441 aa24.53■■□□□ 1.52
TRIM28-204ENST00000594806 ERLIN1O75477 346 aa24.53■■□□□ 1.52
TRIM28-204ENST00000594806 TAC1P20366 129 aa24.53■■□□□ 1.52
TRIM28-204ENST00000594806 CCT5P48643 541 aa24.53■■□□□ 1.52
TRIM28-204ENST00000594806 RGS1Q08116 209 aa24.53■■□□□ 1.52
TRIM28-204ENST00000594806 XKR6Q5GH73 641 aa24.53■■□□□ 1.52
TRIM28-204ENST00000594806 NIPAL1Q6NVV3 410 aa24.53■■□□□ 1.52
TRIM28-204ENST00000594806 TMIGD1Q6UXZ0 262 aa24.53■■□□□ 1.52
TRIM28-204ENST00000594806 ENDOVQ8N8Q3 282 aaKnown RBP24.53■■□□□ 1.52
TRIM28-204ENST00000594806 DRC3Q9H069 523 aa24.53■■□□□ 1.52
TRIM28-204ENST00000594806 ACTL8Q9H568 366 aa24.53■■□□□ 1.52
TRIM28-204ENST00000594806 ZNF304Q9HCX3 659 aa24.53■■□□□ 1.52
TRIM28-204ENST00000594806 A0A1W2PPM1 405 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 TLDC2A0PJX2 215 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 URADA6NGE7 173 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 GOLGA8RI6L899 631 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms