RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 STX2P32856 288 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 SLC12A2P55011 1212 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 CDKN2DP55273 166 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 CCSMST1Q4G0I0 132 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 PAQR3Q6TCH7 311 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 FAM180AQ6UWF9 173 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 LINC00696Q6ZRV3 163 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 ZC3HC1Q86WB0 502 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 BCORP1Q8N888 145 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 CATSPER1Q8NEC5 780 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 EEF1AKMT1Q8WVE0 214 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 IFT81Q8WYA0 676 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 CPNE1Q99829 537 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 MESP1Q9BRJ9 268 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 RHOJQ9H4E5 214 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 ZNF160Q9HCG1 818 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 DMGDHQ9UI17 866 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 C3orf18Q9UK00 162 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 POLEQ07864 2286 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 LOC105369274A0A096LPK9 316 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 LOC102723532A0A0G2JNH3 316 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 A0A0J9YVX5 310 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 A0A1B0GUH1 482 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 FAM95CA0A1B0GW59 222 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 TCRBV9S1A1TA0A576 114 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 OR2A25A4D2G3 310 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 PABPN1LA6NDY0 278 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 FAM159BA6NKW6 160 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 SYF2O95926 243 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 FDXRP22570 491 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 PHBP35232 272 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 TIAL1Q01085 375 aaKnown RBP eCLIP16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 SP140Q13342 867 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 INAQ16352 499 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 MUM1Q2TAK8 710 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 PRTGQ2VWP7 1150 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 ZNF324BQ6AW86 544 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 UBE2R2Q712K3 238 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 PIWIL4Q7Z3Z4 852 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 KBTBD2Q8IY47 623 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 OR4N4Q8N0Y3 316 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 SMPDL3AQ92484 453 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 MVB12AQ96EY5 273 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 LINGO1Q96FE5 620 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 C10orf90Q96M02 699 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 ZFYVE21Q9BQ24 234 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 TRIM54Q9BYV2 358 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 OLAHQ9NV23 265 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 ENTPD4Q9Y227 616 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 PSAT1Q9Y617 370 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 ANKRD12Q6UB98 2062 aa16.68■□□□□ 0.26
SHKBP1-203ENST00000594298 SNRNP200O75643 2136 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 ITPR2Q14571 2701 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 HNRNPRO43390 633 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 NRP2O60462 931 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 HIST1H2AGP0C0S8 130 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 ERGP11308 486 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 COX6A1P12074 109 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 HIST1H2ADP20671 130 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 SAT1P21673 171 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 TNFRSF8P28908 595 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 SOX11P35716 441 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 GP5P40197 560 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 GPX6P59796 221 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 NAB1Q13506 487 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 FBXO42Q6P3S6 717 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 NDUFAF7Q7L592 441 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 CTAGE3PQ8IX95 158 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 IFT20Q8IY31 132 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 NKAPQ8N5F7 415 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 PSMF1Q92530 271 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 TSPAN17Q96FV3 270 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 PDLIM5Q96HC4 596 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 HIST1H2AHQ96KK5 128 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 FMO2Q99518 471 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 PKP4Q99569 1192 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 HIST1H2AJQ99878 128 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 H2AFJQ9BTM1 129 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 PARVBQ9HBI1 364 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 POPDC3Q9HBV1 291 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 CDC14AQ9UNH5 594 aa16.67■□□□□ 0.26
SHKBP1-203ENST00000594298 NSG1A0A0A6YYJ2 146 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 DYTNA2CJ06 578 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 KRT87PA6NCN2 255 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 PCDH17O14917 1159 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 PRPF4O43172 522 aaKnown RBP eCLIP16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 ZG16O60844 167 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 CCNDBP1O95273 360 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 EIF2S1P05198 315 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 PRR35P0CG20 571 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 FBLP22087 321 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 CMPK1P30085 196 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 RPA3P35244 121 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 SPRP35270 261 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 PNLIPRP1P54315 467 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 ARG2P78540 354 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 POU4F1Q01851 419 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 DSG2Q14126 1118 aa16.66■□□□□ 0.26
SHKBP1-203ENST00000594298 FASTKQ14296 549 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms