RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 CCR8P51685 355 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 NEK2P51955 445 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 ERVK-8P63133 956 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 BNC1Q01954 994 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 EMX2Q04743 252 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 CSTF3Q12996 717 aaKnown RBP12.94□□□□□ -0.34
VMP1-217ENST00000593168 GPR18Q14330 331 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 SLBPQ14493 270 aaKnown RBP eCLIP12.94□□□□□ -0.34
VMP1-217ENST00000593168 KIR2DS3Q14952 304 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 NR6A1Q15406 480 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 GSTA3Q16772 222 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 IMPG1Q17R60 797 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 AP5B1Q2VPB7 878 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 TMEM26Q6ZUK4 368 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 C17orf82Q86X59 251 aaPredicted RBP12.94□□□□□ -0.34
VMP1-217ENST00000593168 MARCH9Q86YJ5 346 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 ADGRF3Q8IZF5 1079 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 PATE1Q8WXA2 126 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 METTL2AQ96IZ6 378 aaKnown RBP12.94□□□□□ -0.34
VMP1-217ENST00000593168 AIF1LQ9BQI0 150 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 ACAT2Q9BWD1 397 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 UCK1Q9HA47 277 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 BRF2Q9HAW0 419 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 ARL8BQ9NVJ2 186 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 ADGRE2Q9UHX3 823 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 G3BP2Q9UN86 482 aaKnown RBP12.94□□□□□ -0.34
VMP1-217ENST00000593168 SLC12A4Q9UP95 1085 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 SNX11Q9Y5W9 270 aa12.94□□□□□ -0.34
VMP1-217ENST00000593168 COPG1Q9Y678 874 aaKnown RBP12.94□□□□□ -0.34
VMP1-217ENST00000593168 PIPSLA2A3N6 862 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 B4DGG1 531 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 FOXE1O00358 373 aaPredicted RBP12.93□□□□□ -0.34
VMP1-217ENST00000593168 BTN3A3O00478 584 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 UNC5CO95185 931 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 FKBP9O95302 570 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 CBX6O95503 412 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 IDO1P14902 403 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 PCSK2P16519 638 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 CALB2P22676 271 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 PSMB5P28074 263 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 CMPK1P30085 196 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 PEBP1P30086 187 aaKnown RBP12.93□□□□□ -0.34
VMP1-217ENST00000593168 PIK3CBP42338 1070 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 ARRB1P49407 418 aaPredicted RBP12.93□□□□□ -0.34
VMP1-217ENST00000593168 ACADVLP49748 655 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 STX1BP61266 288 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 HMGCS1Q01581 520 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 HHEXQ03014 270 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 DMTNQ08495 405 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 MAD2L1Q13257 205 aaPredicted RBP12.93□□□□□ -0.34
VMP1-217ENST00000593168 NAA25Q14CX7 972 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 PLCL1Q15111 1095 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 SF1Q15637 639 aaKnown RBP12.93□□□□□ -0.34
VMP1-217ENST00000593168 SPRED3Q2MJR0 410 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.93□□□□□ -0.34
VMP1-217ENST00000593168 TMIGD1Q6UXZ0 262 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 TMPRSS7Q7RTY8 843 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 PARP9Q8IXQ6 854 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 ARL14Q8N4G2 192 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 OR2L3Q8NG85 312 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 BAHD1Q8TBE0 780 aaPredicted RBP12.93□□□□□ -0.34
VMP1-217ENST00000593168 MTFMTQ96DP5 389 aaKnown RBP12.93□□□□□ -0.34
VMP1-217ENST00000593168 CMTM5Q96DZ9 223 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 CMTM7Q96FZ5 175 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 HBEGFQ99075 208 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 ELF4Q99607 663 aaPredicted RBP12.93□□□□□ -0.34
VMP1-217ENST00000593168 ACPTQ9BZG2 426 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 GAREM1Q9H706 876 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 ACTR5Q9H9F9 607 aaPredicted RBP12.93□□□□□ -0.34
VMP1-217ENST00000593168 LRTM1Q9HBL6 345 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 TMEM184CQ9NVA4 438 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 TMEM45AQ9NWC5 275 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 C1orf109Q9NX04 203 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 TOR4AQ9NXH8 423 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 ASIC5Q9NY37 505 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 SPHK1Q9NYA1 384 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 GIMAP2Q9UG22 337 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 TAGLN3Q9UI15 199 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 PPT2Q9UMR5 302 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 ENTPD2Q9Y5L3 495 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 GPR45Q9Y5Y3 372 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 APC2O95996 2303 aa12.93□□□□□ -0.34
VMP1-217ENST00000593168 ISM1B1AKI9 464 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 H7BY64 318 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 NOBOXO60393 691 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 DFNA5O60443 496 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 THRAP10827 490 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 ESRRAP11474 423 aaPredicted RBP12.92□□□□□ -0.34
VMP1-217ENST00000593168 ACPPP15309 386 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 PIK3R1P27986 724 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 SERPINB1P30740 379 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 SCTRP47872 440 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 RASSF2P50749 326 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 YBX1P67809 324 aaKnown RBP12.92□□□□□ -0.34
VMP1-217ENST00000593168 CSNK1G2P78368 415 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 PHEXP78562 749 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 REEP5Q00765 189 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 ACACAQ13085 2346 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 HERC3Q15034 1050 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 KIAA0040Q15053 153 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms