RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 PRRC2CQ9Y520 2896 aaKnown RBP8.75□□□□□ -1.01
DNMT1-223ENST00000591239 SPTA1P02549 2419 aa8.75□□□□□ -1.01
DNMT1-223ENST00000591239 ZNF462Q96JM2 2506 aa8.75□□□□□ -1.01
DNMT1-223ENST00000591239 TRBC2A0A5B9 178 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 VSTM2BA6NLU5 285 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 B8ZZF3 427 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 TAPBPO15533 448 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 PRPF4O43172 522 aaKnown RBP eCLIP8.74□□□□□ -1.01
DNMT1-223ENST00000591239 FOXS1O43638 330 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 OR1F1O43749 312 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 WDR47O94967 919 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 C2P06681 752 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 INHBAP08476 426 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 LTA4HP09960 611 aaKnown RBP8.74□□□□□ -1.01
DNMT1-223ENST00000591239 ZGLP1P0C6A0 271 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 TFEBP19484 476 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 FBLP22087 321 aaKnown RBP8.74□□□□□ -1.01
DNMT1-223ENST00000591239 GGT5P36269 586 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 SLC26A3P40879 764 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 SLC6A12P48065 614 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 KCNC1P48547 511 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 CSRP3P50461 194 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 CCL11P51671 97 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 SNRPNP63162 240 aaKnown RBP8.74□□□□□ -1.01
DNMT1-223ENST00000591239 OCA2Q04671 838 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 DLG1Q12959 904 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 CHAF1BQ13112 559 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 FAM53BQ14153 422 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 NDUFA9Q16795 377 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 C18orf21Q32NC0 220 aaPredicted RBP8.74□□□□□ -1.01
DNMT1-223ENST00000591239 SULT1C3Q6IMI6 304 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 NXPE4Q6UWF7 544 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 SHISA6Q6ZSJ9 500 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 MED25Q71SY5 747 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 CCDC91Q7Z6B0 441 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 MRGPREQ86SM8 312 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 ISCA2Q86U28 154 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 KLHDC8AQ8IYD2 350 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 TCAIMQ8N3R3 496 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 TBC1D19Q8N5T2 526 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 TMEM102Q8N9M5 508 aaPredicted RBP8.74□□□□□ -1.01
DNMT1-223ENST00000591239 MFSD9Q8NBP5 474 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 CAMKVQ8NCB2 501 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 LRRN4CLQ8ND94 238 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 ZNF740Q8NDX6 193 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 STAG3L4Q8TBR4 150 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 SLC44A1Q8WWI5 657 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 SLC13A3Q8WWT9 602 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 SLC5A11Q8WWX8 675 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 NACC2Q96BF6 587 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 MMABQ96EY8 250 aaPredicted RBP8.74□□□□□ -1.01
DNMT1-223ENST00000591239 SPSB2Q99619 263 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 SOX17Q9H6I2 414 aaPredicted RBP8.74□□□□□ -1.01
DNMT1-223ENST00000591239 ALG9Q9H6U8 611 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 CNOT10Q9H9A5 744 aaKnown RBP8.74□□□□□ -1.01
DNMT1-223ENST00000591239 NMRAL1Q9HBL8 299 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 ZNF71Q9NQZ8 489 aaPredicted RBP8.74□□□□□ -1.01
DNMT1-223ENST00000591239 ACSS2Q9NR19 701 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 SNX15Q9NRS6 342 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 IGSF5Q9NSI5 407 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 WWOXQ9NZC7 414 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 CD274Q9NZQ7 290 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 ZNF282Q9UDV7 671 aaPredicted RBP8.74□□□□□ -1.01
DNMT1-223ENST00000591239 NXT1Q9UKK6 140 aaKnown RBP8.74□□□□□ -1.01
DNMT1-223ENST00000591239 RNF112Q9ULX5 631 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 ACOT9Q9Y305 439 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 DYRK1BQ9Y463 629 aa8.74□□□□□ -1.01
DNMT1-223ENST00000591239 GCN1Q92616 2671 aaKnown RBP8.74□□□□□ -1.01
DNMT1-223ENST00000591239 IGLV3-12A0A075B6K2 115 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 A0A087WUV0 522 aaPredicted RBP8.73□□□□□ -1.01
DNMT1-223ENST00000591239 A0A087X1B8 175 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 A0A0A6YYC8 382 aaPredicted RBP8.73□□□□□ -1.01
DNMT1-223ENST00000591239 I3L1I5 382 aaPredicted RBP8.73□□□□□ -1.01
DNMT1-223ENST00000591239 PEX12O00623 359 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 NDUFS4O43181 175 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 IPO13O94829 963 aaKnown RBP8.73□□□□□ -1.01
DNMT1-223ENST00000591239 ALDOAP04075 364 aaKnown RBP8.73□□□□□ -1.01
DNMT1-223ENST00000591239 FAM153BP0C7A2 387 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 SLC35G6P0C7Q6 338 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 GNAZP19086 355 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 MMP11P24347 488 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 TYK2P29597 1187 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 HSPA7P48741 367 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 SERPINB8P50452 374 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 RRADP55042 308 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 IRF9Q00978 393 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 KLC1Q07866 573 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 CDC16Q13042 620 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 FAM83EQ2M2I3 478 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 FAM153CQ494X1 144 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 LACTB2Q53H82 288 aaPredicted RBP8.73□□□□□ -1.01
DNMT1-223ENST00000591239 FBXO48Q5FWF7 155 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 VWA2Q5GFL6 755 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 TMEM214Q6NUQ4 689 aaKnown RBP8.73□□□□□ -1.01
DNMT1-223ENST00000591239 TCTN3Q6NUS6 607 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 PRSS41Q7RTY9 318 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 PPP1R32Q7Z5V6 425 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 TMPRSS11BQ86T26 416 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 ZNF605Q86T29 641 aa8.73□□□□□ -1.01
DNMT1-223ENST00000591239 ASPGQ86U10 573 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms