RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 BLACEA4D250 179 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 AGPSO00116 658 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 DLX3O60479 287 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 RAD1O60671 282 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 PROCP04070 461 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 UQCRHP07919 91 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 FGF5P12034 268 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 ZNF28P17035 718 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 VARSP26640 1264 aaKnown RBP20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 ACY1Q03154 408 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 OR4N4Q8N0Y3 316 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 SNX31Q8N9S9 440 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 SLC5A11Q8WWX8 675 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 MOCOSQ96EN8 888 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 APOPT1Q96IL0 206 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 SLC45A3Q96JT2 553 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 CNOT10Q9H9A5 744 aaKnown RBP20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 TMEM184CQ9NVA4 438 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 ARGLU1Q9NWB6 273 aaPredicted RBP20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 SNX7Q9UNH6 387 aa20.53■□□□□ 0.88
R3HDM4-206ENST00000590454 FEZF1A0PJY2 475 aa20.52■□□□□ 0.88
R3HDM4-206ENST00000590454 A8MT66 165 aa20.52■□□□□ 0.88
R3HDM4-206ENST00000590454 E7EQ34 232 aa20.52■□□□□ 0.88
R3HDM4-206ENST00000590454 H3BMH7 237 aa20.52■□□□□ 0.88
R3HDM4-206ENST00000590454 PLIN3O60664 434 aa20.52■□□□□ 0.88
R3HDM4-206ENST00000590454 IPO13O94829 963 aaKnown RBP20.52■□□□□ 0.88
R3HDM4-206ENST00000590454 CDC16Q13042 620 aa20.52■□□□□ 0.88
R3HDM4-206ENST00000590454 DCAF12Q5T6F0 453 aa20.52■□□□□ 0.88
R3HDM4-206ENST00000590454 PWWP2BQ6NUJ5 590 aa20.52■□□□□ 0.88
R3HDM4-206ENST00000590454 RPS27LQ71UM5 84 aaKnown RBP20.52■□□□□ 0.88
R3HDM4-206ENST00000590454 RNF44Q7L0R7 432 aa20.52■□□□□ 0.88
R3HDM4-206ENST00000590454 EXOC3L1Q86VI1 746 aa20.52■□□□□ 0.88
R3HDM4-206ENST00000590454 ZNF740Q8NDX6 193 aa20.52■□□□□ 0.88
R3HDM4-206ENST00000590454 ABHD11Q8NFV4 315 aa20.52■□□□□ 0.88
R3HDM4-206ENST00000590454 SLC17A7Q9P2U7 560 aa20.52■□□□□ 0.88
R3HDM4-206ENST00000590454 RARRES3Q9UL19 164 aa20.52■□□□□ 0.88
R3HDM4-206ENST00000590454 PLCL2Q9UPR0 1127 aa20.52■□□□□ 0.88
R3HDM4-206ENST00000590454 DYRK1BQ9Y463 629 aa20.52■□□□□ 0.88
R3HDM4-206ENST00000590454 MDC1Q14676 2089 aaKnown RBP20.52■□□□□ 0.87
R3HDM4-206ENST00000590454 SDK2Q58EX2 2172 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 G3V2L1 256 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 NKX2-8O15522 239 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 MAP3K7O43318 606 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 LCMT2O60294 686 aaKnown RBP20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 SMIM24O75264 130 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 STATHP02808 62 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 MSL3P1P0C860 447 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 EEF1DP29692 281 aaKnown RBP20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 CCT5P48643 541 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 RAB15P59190 212 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 IL11RAQ14626 422 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 PCBP2Q15366 365 aaKnown RBP eCLIP20.51■□□□□ 0.871e-6■■■■■ 59.7
R3HDM4-206ENST00000590454 PDK4Q16654 411 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 NXPE4Q6UWF7 544 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 SLCO4C1Q6ZQN7 724 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 LRRC70Q7Z2Q7 622 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 TMPRSS11BQ86T26 416 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 TEX9Q8N6V9 391 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 OR4K1Q8NGD4 311 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 PGM2Q96G03 612 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 ABHD17AQ96GS6 310 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 NSUN5Q96P11 429 aaKnown RBP20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 EFHD1Q9BUP0 239 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 GPN2Q9H9Y4 310 aaPredicted RBP20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 MKS1Q9NXB0 559 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 OPTCQ9UBM4 332 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 GRID1Q9ULK0 1009 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 KCNE2Q9Y6J6 123 aa20.51■□□□□ 0.87
R3HDM4-206ENST00000590454 FLNCQ14315 2725 aa20.5■□□□□ 0.87
R3HDM4-206ENST00000590454 K7EPI3 171 aa20.5■□□□□ 0.87
R3HDM4-206ENST00000590454 BCL6P41182 706 aa20.5■□□□□ 0.87
R3HDM4-206ENST00000590454 CCR8P51685 355 aa20.5■□□□□ 0.87
R3HDM4-206ENST00000590454 VSX2P58304 361 aaPredicted RBP20.5■□□□□ 0.87
R3HDM4-206ENST00000590454 CEACAM20Q6UY09 585 aa20.5■□□□□ 0.87
R3HDM4-206ENST00000590454 ATCAYQ86WG3 371 aa20.5■□□□□ 0.87
R3HDM4-206ENST00000590454 PPP1R3BQ86XI6 285 aa20.5■□□□□ 0.87
R3HDM4-206ENST00000590454 APOBEC4Q8WW27 367 aaKnown RBP20.5■□□□□ 0.87
R3HDM4-206ENST00000590454 KIAA1143Q96AT1 154 aaPredicted RBP20.5■□□□□ 0.87
R3HDM4-206ENST00000590454 OR2A5Q96R48 311 aa20.5■□□□□ 0.87
R3HDM4-206ENST00000590454 SMC6Q96SB8 1091 aa20.5■□□□□ 0.87
R3HDM4-206ENST00000590454 ZFYVE21Q9BQ24 234 aa20.5■□□□□ 0.87
R3HDM4-206ENST00000590454 SPRY4Q9C004 299 aa20.5■□□□□ 0.87
R3HDM4-206ENST00000590454 TMBIM4Q9HC24 238 aa20.5■□□□□ 0.87
R3HDM4-206ENST00000590454 PLLPQ9Y342 182 aa20.5■□□□□ 0.87
R3HDM4-206ENST00000590454 H0YGG7 62 aa20.49■□□□□ 0.87
R3HDM4-206ENST00000590454 STX16-NPEPL1H3BU86 382 aa20.49■□□□□ 0.87
R3HDM4-206ENST00000590454 E2F3O00716 465 aa20.49■□□□□ 0.87
R3HDM4-206ENST00000590454 STX16O14662 325 aa20.49■□□□□ 0.87
R3HDM4-206ENST00000590454 TYROBPO43914 113 aa20.49■□□□□ 0.87
R3HDM4-206ENST00000590454 SASH3O75995 380 aa20.49■□□□□ 0.87
R3HDM4-206ENST00000590454 MYZAPP0CAP1 466 aa20.49■□□□□ 0.87
R3HDM4-206ENST00000590454 PRKAR1AP10644 381 aa20.49■□□□□ 0.87
R3HDM4-206ENST00000590454 EZRP15311 586 aaKnown RBP20.49■□□□□ 0.87
R3HDM4-206ENST00000590454 CD22P20273 847 aa20.49■□□□□ 0.87
R3HDM4-206ENST00000590454 ARF3P61204 181 aaPredicted RBP20.49■□□□□ 0.87
R3HDM4-206ENST00000590454 CDC20Q12834 499 aa20.49■□□□□ 0.87
R3HDM4-206ENST00000590454 NAA25Q14CX7 972 aa20.49■□□□□ 0.87
R3HDM4-206ENST00000590454 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.49■□□□□ 0.87
R3HDM4-206ENST00000590454 LACTB2Q53H82 288 aaPredicted RBP20.49■□□□□ 0.87
R3HDM4-206ENST00000590454 ZC3H12BQ5HYM0 836 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms