RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 ZNF451Q9Y4E5 1061 aa17.13■□□□□ 0.33
CIRBP-227ENST00000590188 SPENQ96T58 3664 aaKnown RBP17.13■□□□□ 0.33
CIRBP-227ENST00000590188 TXNDC9O14530 226 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 SERPIND1P05546 499 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 GSTA2P09210 222 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 ITGA3P26006 1051 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 EMP3P54852 163 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 RELAQ04206 551 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 DSG2Q14126 1118 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 SLMAPQ14BN4 828 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 KIRREL2Q6UWL6 708 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 ASPGQ86U10 573 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 THOC6Q86W42 341 aaKnown RBP17.12■□□□□ 0.33
CIRBP-227ENST00000590188 PARP9Q8IXQ6 854 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 AMER3Q8N944 861 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 KCT2Q8NC54 265 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 ZNF740Q8NDX6 193 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 SLC5A11Q8WWX8 675 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 NEIL2Q969S2 332 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 GPR22Q99680 433 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 SPNS1Q9H2V7 528 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 POPDC3Q9HBV1 291 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 MLXIPLQ9NP71 852 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 ATP13A2Q9NQ11 1180 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 SEMA3GQ9NS98 782 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 NOVA2Q9UNW9 492 aaKnown RBP17.12■□□□□ 0.33
CIRBP-227ENST00000590188 SLC22A14Q9Y267 594 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 DYRK1BQ9Y463 629 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 OARD1Q9Y530 152 aa17.12■□□□□ 0.33
CIRBP-227ENST00000590188 SPTA1P02549 2419 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 PRPF4O43172 522 aaKnown RBP eCLIP17.11■□□□□ 0.33
CIRBP-227ENST00000590188 OR1F1O43749 312 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 CCDC166P0CW27 439 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 STMN1P16949 149 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 STX2P32856 288 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 SLC26A3P40879 764 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 AVPR1BP47901 424 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 CCR8P51685 355 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 KCNC4Q03721 635 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 CSHL1Q14406 222 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 TUBB8Q3ZCM7 444 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 FBXO48Q5FWF7 155 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 UBAP2Q5T6F2 1119 aaKnown RBP17.11■□□□□ 0.33
CIRBP-227ENST00000590188 TMPRSS11BQ86T26 416 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 ADAMTSL2Q86TH1 951 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 MFSD9Q8NBP5 474 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 NOA1Q8NC60 698 aaKnown RBP17.11■□□□□ 0.33
CIRBP-227ENST00000590188 CAMKVQ8NCB2 501 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 SLC13A3Q8WWT9 602 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 EXT2Q93063 718 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 MOCOSQ96EN8 888 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 MVB12AQ96EY5 273 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 TSPAN17Q96FV3 270 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 PHACTR1Q9C0D0 580 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 ZDHHC18Q9NUE0 388 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 HCN3Q9P1Z3 774 aa17.11■□□□□ 0.33
CIRBP-227ENST00000590188 KCNE1BA0A087WTH5 132 aa17.1■□□□□ 0.33
CIRBP-227ENST00000590188 SGK494L7N484 410 aa17.1■□□□□ 0.33
CIRBP-227ENST00000590188 NDUFS4O43181 175 aa17.1■□□□□ 0.33
CIRBP-227ENST00000590188 JRKO75564 520 aa17.1■□□□□ 0.33
CIRBP-227ENST00000590188 WISP3O95389 354 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-227ENST00000590188 IGHEP01854 428 aa17.1■□□□□ 0.33
CIRBP-227ENST00000590188 HEXBP07686 556 aa17.1■□□□□ 0.33
CIRBP-227ENST00000590188 SPRP35270 261 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-227ENST00000590188 GDF5P43026 501 aa17.1■□□□□ 0.33
CIRBP-227ENST00000590188 EMP2P54851 167 aa17.1■□□□□ 0.33
CIRBP-227ENST00000590188 EEF1A2Q05639 463 aaKnown RBP17.1■□□□□ 0.33
CIRBP-227ENST00000590188 GRTP1Q5TC63 336 aa17.1■□□□□ 0.33
CIRBP-227ENST00000590188 MFSD4BQ5TF39 518 aa17.1■□□□□ 0.33
CIRBP-227ENST00000590188 CMC1Q7Z7K0 106 aa17.1■□□□□ 0.33
CIRBP-227ENST00000590188 OR11G2Q8NGC1 345 aa17.1■□□□□ 0.33
CIRBP-227ENST00000590188 THAP11Q96EK4 314 aa17.1■□□□□ 0.33
CIRBP-227ENST00000590188 SMAD5Q99717 465 aaKnown RBP17.1■□□□□ 0.33
CIRBP-227ENST00000590188 DERL2Q9GZP9 239 aa17.1■□□□□ 0.33
CIRBP-227ENST00000590188 ZNF552Q9H707 407 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-227ENST00000590188 PLAAQ9Y263 795 aa17.1■□□□□ 0.33
CIRBP-227ENST00000590188 MAP4K5Q9Y4K4 846 aa17.1■□□□□ 0.33
CIRBP-227ENST00000590188 GCN1Q92616 2671 aaKnown RBP17.1■□□□□ 0.33
CIRBP-227ENST00000590188 IGLV3-12A0A075B6K2 115 aa17.09■□□□□ 0.33
CIRBP-227ENST00000590188 ZNF860A6NHJ4 632 aa17.09■□□□□ 0.33
CIRBP-227ENST00000590188 TTLL8A6PVC2 850 aa17.09■□□□□ 0.33
CIRBP-227ENST00000590188 IDSB3KWA1 339 aa17.09■□□□□ 0.33
CIRBP-227ENST00000590188 MAP2K7O14733 419 aa17.09■□□□□ 0.33
CIRBP-227ENST00000590188 DPM1O60762 260 aa17.09■□□□□ 0.33
CIRBP-227ENST00000590188 WDR47O94967 919 aa17.09■□□□□ 0.33
CIRBP-227ENST00000590188 B3GALT4O96024 378 aa17.09■□□□□ 0.33
CIRBP-227ENST00000590188 SLC35G6P0C7Q6 338 aa17.09■□□□□ 0.33
CIRBP-227ENST00000590188 ACPPP15309 386 aa17.09■□□□□ 0.33
CIRBP-227ENST00000590188 CD1DP15813 335 aa17.09■□□□□ 0.33
CIRBP-227ENST00000590188 VARSP26640 1264 aaKnown RBP17.09■□□□□ 0.33
CIRBP-227ENST00000590188 CD97P48960 835 aa17.09■□□□□ 0.33
CIRBP-227ENST00000590188 CSRP3P50461 194 aa17.09■□□□□ 0.33
CIRBP-227ENST00000590188 RAB10P61026 200 aa17.09■□□□□ 0.33
CIRBP-227ENST00000590188 AIMP2Q13155 320 aaKnown RBP17.09■□□□□ 0.33
CIRBP-227ENST00000590188 FAM53BQ14153 422 aa17.09■□□□□ 0.33
CIRBP-227ENST00000590188 MYBPC3Q14896 1274 aa17.09■□□□□ 0.33
CIRBP-227ENST00000590188 OR4D1Q15615 310 aa17.09■□□□□ 0.33
CIRBP-227ENST00000590188 UAP1Q16222 522 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-227ENST00000590188 VWA5B1Q5TIE3 1220 aa17.09■□□□□ 0.33
CIRBP-227ENST00000590188 TMEM214Q6NUQ4 689 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms