RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 CLEC1AQ8NC01 280 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 NOA1Q8NC60 698 aaKnown RBP11.49□□□□□ -0.57
TPM4-212ENST00000590180 SLC13A3Q8WWT9 602 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 SLC5A11Q8WWX8 675 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 MVB12AQ96EY5 273 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 VPS50Q96JG6 964 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 TSNARE1Q96NA8 513 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 OR4K3Q96R72 315 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 SPSB2Q99619 263 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 GPR22Q99680 433 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 DRC3Q9H069 523 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 SEMA3GQ9NS98 782 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 GPR83Q9NYM4 423 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 MTRF1LQ9UGC7 380 aaKnown RBP11.49□□□□□ -0.57
TPM4-212ENST00000590180 C3orf18Q9UK00 162 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 SLC22A14Q9Y267 594 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 ZNF451Q9Y4E5 1061 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 OARD1Q9Y530 152 aa11.49□□□□□ -0.57
TPM4-212ENST00000590180 PCDHGA9Q9Y5G4 932 aaKnown RBP11.49□□□□□ -0.57
TPM4-212ENST00000590180 GCN1Q92616 2671 aaKnown RBP11.49□□□□□ -0.57
TPM4-212ENST00000590180 FOXS1O43638 330 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 H2AFYO75367 372 aaKnown RBP11.48□□□□□ -0.57
TPM4-212ENST00000590180 CEACAM4O75871 244 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 HEXBP07686 556 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 CXCR2P25025 360 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 ITGA3P26006 1051 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 CASRP41180 1078 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 BCL6P41182 706 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 HNMTP50135 292 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 RAB10P61026 200 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 ATP6V0D1P61421 351 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 TLE1Q04724 770 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 DSG2Q14126 1118 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 FAM53BQ14153 422 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 SLMAPQ14BN4 828 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 SYT16Q17RD7 645 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 FAAH2Q6GMR7 532 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 CEP128Q6ZU80 1094 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 VN1R4Q7Z5H5 301 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 LAPTM4BQ86VI4 370 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 GPSM1Q86YR5 675 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 GALNT16Q8N428 558 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 KCT2Q8NC54 265 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 ABHD11Q8NFV4 315 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 OR9A4Q8NGU2 314 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 NEIL2Q969S2 332 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 NACC2Q96BF6 587 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 NUDT9Q9BW91 350 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 MFRPQ9BY79 579 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 DERL2Q9GZP9 239 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 ANKHQ9HCJ1 492 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 MLXIPLQ9NP71 852 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 ZDHHC18Q9NUE0 388 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 DMGDHQ9UI17 866 aaKnown RBP11.48□□□□□ -0.57
TPM4-212ENST00000590180 FBXL4Q9UKA2 621 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 MRPS2Q9Y399 296 aaKnown RBP11.48□□□□□ -0.57
TPM4-212ENST00000590180 HS3ST3B1Q9Y662 390 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 KCNE2Q9Y6J6 123 aa11.48□□□□□ -0.57
TPM4-212ENST00000590180 SOCS6O14544 535 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 KLHL41O60662 606 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 ALOX12BO75342 701 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 WISP1O95388 367 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 C1QAP02745 245 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 CD1DP15813 335 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 IL1RNP18510 177 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 PHBP35232 272 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 SLC26A3P40879 764 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 GDF5P43026 501 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 MAT1AQ00266 395 aaKnown RBP11.47□□□□□ -0.57
TPM4-212ENST00000590180 CDKL1Q00532 357 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 KCNC4Q03721 635 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 NAB1Q13506 487 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 RBBP5Q15291 538 aaKnown RBP11.47□□□□□ -0.57
TPM4-212ENST00000590180 UAP1Q16222 522 aaPredicted RBP11.47□□□□□ -0.57
TPM4-212ENST00000590180 PPP1R3AQ16821 1122 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 C18orf21Q32NC0 220 aaPredicted RBP11.47□□□□□ -0.57
TPM4-212ENST00000590180 GLE1Q53GS7 698 aaKnown RBP11.47□□□□□ -0.57
TPM4-212ENST00000590180 IRAK1BP1Q5VVH5 260 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 NXPE4Q6UWF7 544 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 KIRREL2Q6UWL6 708 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 PARP9Q8IXQ6 854 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 OR4K1Q8NGD4 311 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 ZCCHC10Q8TBK6 192 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 TM4SF19Q96DZ7 209 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 FAM129AQ9BZQ8 928 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 TSPYL1Q9H0U9 437 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 EPN3Q9H201 632 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 MKKSQ9NPJ1 570 aaPredicted RBP11.47□□□□□ -0.57
TPM4-212ENST00000590180 MAP4K5Q9Y4K4 846 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 PCDHGB7Q9Y5F8 929 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 SCN3AQ9NY46 2000 aa11.47□□□□□ -0.57
TPM4-212ENST00000590180 IGLV3-12A0A075B6K2 115 aa11.46□□□□□ -0.57
TPM4-212ENST00000590180 TRBC2A0A5B9 178 aa11.46□□□□□ -0.57
TPM4-212ENST00000590180 TTLL8A6PVC2 850 aa11.46□□□□□ -0.57
TPM4-212ENST00000590180 SGK494L7N484 410 aa11.46□□□□□ -0.57
TPM4-212ENST00000590180 MAP2K7O14733 419 aa11.46□□□□□ -0.57
TPM4-212ENST00000590180 DPM1O60762 260 aa11.46□□□□□ -0.57
TPM4-212ENST00000590180 WDR47O94967 919 aa11.46□□□□□ -0.57
TPM4-212ENST00000590180 ZIC2O95409 532 aaPredicted RBP11.46□□□□□ -0.57
TPM4-212ENST00000590180 S100BP04271 92 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms