RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 COMMD10Q9Y6G5 202 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 PCNX1Q96RV3 2341 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 POLQO75417 2590 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 ASPDHA6ND91 283 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 A8MUI8 341 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 GOLGA8KD6RF30 607 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 GOLGA8TH3BQL2 631 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 H7BY64 318 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 HAT1O14929 419 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 MAT1AQ00266 395 aaKnown RBP13.21□□□□□ -0.29
VMP1-209ENST00000588915 KCNJ11Q14654 390 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 TMEM214Q6NUQ4 689 aaKnown RBP13.21□□□□□ -0.29
VMP1-209ENST00000588915 CES3Q6UWW8 571 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 CYHR1Q6ZMK1 362 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 GSTA5Q7RTV2 222 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 SPPL2CQ8IUH8 684 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 LMNTD2Q8IXW0 634 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 LGI4Q8N135 537 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 HORMAD2Q8N7B1 307 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 TMEM178AQ8NBL3 297 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 CAMKVQ8NCB2 501 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 PLPP5Q8NEB5 264 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 OR9A4Q8NGU2 314 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 OR51Q1Q8NH59 317 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 KCNJ9Q92806 393 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 FAM136AQ96C01 138 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 TM4SF19Q96DZ7 209 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 GPR137Q96N19 417 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 PRAP1Q96NZ9 151 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 UTP23Q9BRU9 249 aaKnown RBP13.21□□□□□ -0.29
VMP1-209ENST00000588915 CCDC68Q9H2F9 335 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 KCNK13Q9HB14 408 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 MMP25Q9NPA2 562 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 HOMER3Q9NSC5 361 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 TSR3Q9UJK0 312 aaKnown RBP13.21□□□□□ -0.29
VMP1-209ENST00000588915 DHRS7Q9Y394 339 aa13.21□□□□□ -0.29
VMP1-209ENST00000588915 FBN2P35556 2912 aa13.21□□□□□ -0.3
VMP1-209ENST00000588915 ANKRD17O75179 2603 aaKnown RBP13.2□□□□□ -0.3
VMP1-209ENST00000588915 FAM237BA0A1B0GVD1 139 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 SEC24DO94855 1032 aaPredicted RBP13.2□□□□□ -0.3
VMP1-209ENST00000588915 CLDN14O95500 239 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 CD46P15529 392 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 CAPN3P20807 821 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 IMPA1P29218 277 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 EEF1DP29692 281 aaKnown RBP13.2□□□□□ -0.3
VMP1-209ENST00000588915 SSTR2P30874 369 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 MAGEA6P43360 314 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 XCR1P46094 333 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 ADORA2A-AS1P86434 159 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 TUBA3CQ13748 450 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 C3AR1Q16581 482 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 MINDY4Q4G0A6 757 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 THEMIS2Q5TEJ8 643 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 LRRC8EQ6NSJ5 796 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 TUBA3EQ6PEY2 450 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 VN1R4Q7Z5H5 301 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 ANKRD37Q7Z713 158 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 BEST3Q8N1M1 668 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 PRELID2Q8N945 189 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 FAM98AQ8NCA5 519 aaKnown RBP13.2□□□□□ -0.3
VMP1-209ENST00000588915 PPFIBP2Q8ND30 876 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 MDS2Q8NDY4 140 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 ADAMTS18Q8TE60 1221 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 SCMH1Q96GD3 660 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 MAGED4Q96JG8 741 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 GPAMQ9HCL2 828 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 CCDC177Q9NQR7 707 aaPredicted RBP13.2□□□□□ -0.3
VMP1-209ENST00000588915 SLC22A7Q9Y694 548 aa13.2□□□□□ -0.3
VMP1-209ENST00000588915 NCOA6Q14686 2063 aaPredicted RBP13.19□□□□□ -0.3
VMP1-209ENST00000588915 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.19□□□□□ -0.3
VMP1-209ENST00000588915 CTAGE9A4FU28 777 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 SYF2O95926 243 aaKnown RBP13.19□□□□□ -0.3
VMP1-209ENST00000588915 MLNP12872 115 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 CD96P40200 585 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 ALDH6A1Q02252 535 aaKnown RBP13.19□□□□□ -0.3
VMP1-209ENST00000588915 THOC5Q13769 683 aaKnown RBP13.19□□□□□ -0.3
VMP1-209ENST00000588915 MFSD4BQ5TF39 518 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 NIPAL1Q6NVV3 410 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 LANCL3Q6ZV70 420 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 PLD3Q8IV08 490 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 EID3Q8N140 333 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 SLC5A8Q8N695 610 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 MTFMTQ96DP5 389 aaKnown RBP13.19□□□□□ -0.3
VMP1-209ENST00000588915 C14orf79Q96F83 325 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 CCDC138Q96M89 665 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 OR1F2PQ96R84 312 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 LPAR4Q99677 370 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 SLC30A3Q99726 388 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 SPOCK3Q9BQ16 436 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 TRIM8Q9BZR9 551 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 ANKHQ9HCJ1 492 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 SH3BGRL2Q9UJC5 107 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 GUCA1BQ9UMX6 200 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 MED16Q9Y2X0 877 aa13.19□□□□□ -0.3
VMP1-209ENST00000588915 F8P00451 2351 aa13.18□□□□□ -0.3
VMP1-209ENST00000588915 CSMD2Q7Z408 3487 aa13.18□□□□□ -0.3
VMP1-209ENST00000588915 IGHV3-20A0A0C4DH32 117 aa13.18□□□□□ -0.3
VMP1-209ENST00000588915 TCRBV7S3A2A0A539 114 aa13.18□□□□□ -0.3
VMP1-209ENST00000588915 CCND1P24385 295 aa13.18□□□□□ -0.3
VMP1-209ENST00000588915 GRK3P35626 688 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms